Gene Rsph17029_2792 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_2792 
SymboldapD 
ID4897703 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009049 
Strand
Start bp2941633 
End bp2942457 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content68% 
IMG OID640113394 
Product2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase 
Protein accessionYP_001044666 
Protein GI126463552 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2171] Tetrahydrodipicolinate N-succinyltransferase 
TIGRFAM ID[TIGR00965] 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.463697 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGTATT CCGCGCTCGA AGCCGCCATC GAAGCCGCCT GGGAGGCGCG CGAGACGATC 
ACCCCGGCCA CCAAGGGCGA GACCCGCGAG GCCATCGAGG CGACGCTCGA GGCGCTCGAC
AAGGGCAGCC TGCGGGTGGC CGAGAAGCGC GGCGCGGACT GGCATGTCAA CCAGTGGGCG
AAGAAGGCGG TGCTGCTCGG CTTCCGGCTG AAGGACATGG AAGTGCAGAC GGGCGGCCCG
CAAGCAGGGA CCTGGTGGGA CAAGGTCGAC AGCAAGTTCG CCCAGTGGGG CGAGGCGCAA
TGGAAGGCCG CGGGCTTCCG CGCGGTGCCG AACTGCATCG TCCGCCGCTC GGCCTACATC
GCCAGGGGCG TCGTTCTGAT GCCCTCGTTC GTGAACCTCG GCGCCTATGT CGATGAGAGC
ACCATGGTCG ACACCTGGGC CACCGTCGGC TCCTGCGCGC AGATCGGCAA GAACGTGCAC
CTGTCGGGCG GCGTCGGCAT CGGCGGCGTG CTGGAGCCGA TGCAGGCCGG CCCCACCATC
ATCGAGGACA ACTGCTTCAT CGGCGCGCGT TCGGAAGTGG TCGAGGGCTG CATCGTCCGC
GAAGGCTCGG TGCTGGGCAT GGGCGTCTTC ATCGGCAAGT CGACGAAGAT CGTGGATCGC
GAGACGGGCG AGGTCATGTA TGGCGAAGTG CCCGCAGGCT CGGTCGTCGT GGCGGGGTCG
ATGCCCTCGA AGGGCGGCGT GAACCTCTAT TGCGCCGTGA TCGTGAAGCG CGTGGATGCG
CAGACGCGCT CGAAGACCTC GATCAACGAG CTGCTGCGGG ACTGA
 
Protein sequence
MSYSALEAAI EAAWEARETI TPATKGETRE AIEATLEALD KGSLRVAEKR GADWHVNQWA 
KKAVLLGFRL KDMEVQTGGP QAGTWWDKVD SKFAQWGEAQ WKAAGFRAVP NCIVRRSAYI
ARGVVLMPSF VNLGAYVDES TMVDTWATVG SCAQIGKNVH LSGGVGIGGV LEPMQAGPTI
IEDNCFIGAR SEVVEGCIVR EGSVLGMGVF IGKSTKIVDR ETGEVMYGEV PAGSVVVAGS
MPSKGGVNLY CAVIVKRVDA QTRSKTSINE LLRD