Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_2792 |
Symbol | dapD |
ID | 4897703 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009049 |
Strand | - |
Start bp | 2941633 |
End bp | 2942457 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640113394 |
Product | 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase |
Protein accession | YP_001044666 |
Protein GI | 126463552 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2171] Tetrahydrodipicolinate N-succinyltransferase |
TIGRFAM ID | [TIGR00965] 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.463697 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGTATT CCGCGCTCGA AGCCGCCATC GAAGCCGCCT GGGAGGCGCG CGAGACGATC ACCCCGGCCA CCAAGGGCGA GACCCGCGAG GCCATCGAGG CGACGCTCGA GGCGCTCGAC AAGGGCAGCC TGCGGGTGGC CGAGAAGCGC GGCGCGGACT GGCATGTCAA CCAGTGGGCG AAGAAGGCGG TGCTGCTCGG CTTCCGGCTG AAGGACATGG AAGTGCAGAC GGGCGGCCCG CAAGCAGGGA CCTGGTGGGA CAAGGTCGAC AGCAAGTTCG CCCAGTGGGG CGAGGCGCAA TGGAAGGCCG CGGGCTTCCG CGCGGTGCCG AACTGCATCG TCCGCCGCTC GGCCTACATC GCCAGGGGCG TCGTTCTGAT GCCCTCGTTC GTGAACCTCG GCGCCTATGT CGATGAGAGC ACCATGGTCG ACACCTGGGC CACCGTCGGC TCCTGCGCGC AGATCGGCAA GAACGTGCAC CTGTCGGGCG GCGTCGGCAT CGGCGGCGTG CTGGAGCCGA TGCAGGCCGG CCCCACCATC ATCGAGGACA ACTGCTTCAT CGGCGCGCGT TCGGAAGTGG TCGAGGGCTG CATCGTCCGC GAAGGCTCGG TGCTGGGCAT GGGCGTCTTC ATCGGCAAGT CGACGAAGAT CGTGGATCGC GAGACGGGCG AGGTCATGTA TGGCGAAGTG CCCGCAGGCT CGGTCGTCGT GGCGGGGTCG ATGCCCTCGA AGGGCGGCGT GAACCTCTAT TGCGCCGTGA TCGTGAAGCG CGTGGATGCG CAGACGCGCT CGAAGACCTC GATCAACGAG CTGCTGCGGG ACTGA
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Protein sequence | MSYSALEAAI EAAWEARETI TPATKGETRE AIEATLEALD KGSLRVAEKR GADWHVNQWA KKAVLLGFRL KDMEVQTGGP QAGTWWDKVD SKFAQWGEAQ WKAAGFRAVP NCIVRRSAYI ARGVVLMPSF VNLGAYVDES TMVDTWATVG SCAQIGKNVH LSGGVGIGGV LEPMQAGPTI IEDNCFIGAR SEVVEGCIVR EGSVLGMGVF IGKSTKIVDR ETGEVMYGEV PAGSVVVAGS MPSKGGVNLY CAVIVKRVDA QTRSKTSINE LLRD
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