| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_2725 |
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| Symbol | |
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| ID | 4896272 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009049 |
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| Strand | + |
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| Start bp | 2868485 |
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| End bp | 2870356 |
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| Gene Length | 1872 bp |
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| Protein Length | 623 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640113327 |
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| Product | putative inner membrane protein translocase component YidC |
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| Protein accession | YP_001044599 |
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| Protein GI | 126463485 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0706] Preprotein translocase subunit YidC |
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| TIGRFAM ID | [TIGR03592] membrane protein insertase, YidC/Oxa1 family, C-terminal domain
[TIGR03593] membrane protein insertase, YidC/Oxa1 family, N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0447899 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGATC AGAACAAGAA CCTCATCCTG GCGACCGGAC TCAGCTTCCT CGTGATCATG
GTCTGGTTCT TCCTGTTCCC GCCCCCGGAG GCGGTGACGG AAGGCGAGAC CACGGTCGCG
ACGCAGCAAA CCGCCGTGGC CCCCTCGGCC ACCCCGGATG CTCCGACGAC CGCCGTGCCG
CCGGACGCGG AGCTGCCCGA GACCCAGCGT GTCGTCATCG ACACGCCGCG GCTGCAGGGG
TCGATCTCCA TGCTGGGCGG GCGGCTCGAC GACCTGTCGC TCAAGTCCTA CCACGAGACG
CTCGATCCGC AGTCGCAGAT CGTCCGCCTG CTCTCGCCGG TGGGCCAGCC CAACGCCTAT
TACGCCCTGT ACGGCTGGAC CCCCGCCGGA GCGCTCGGCT ACGAGGACGT GCCCGGAGCC
AACACGACCT GGACCCAGGT CGGCAGCGGC GCGCTCGGCG TGGACCAGCC GGTGACGCTG
CAGTGGGACA ACGGCAAGGG TCTCGTCTTC ACGCGGACGA TCTCGGTCGA TGACCATTAC
ATGTTCAGCG TGGCGCAGAC GGTCGAGAAC AATTCCGGCC AGGCCGTCCA GCTCGCGCCG
TACGGCATCG TCGCCCGTCA CGGCAAGCCC CTGAACCTGC AGAATTTCTT CGTTCTTCAC
GAGGGGGTCG TCGGCCGCGC CGACGGCAAG CTCACCGAGA CGAAATACGA CAAGGTGGCC
GAGCTGCCGC AGGTCGCGCG CGAAGGCGCG CAGGCCGAGG TGATCGACGC GCAGCAGGAC
GGCTGGATCG GCTTCACCGA CAAATACTGG ATGACGACGC TGATCCCGCA GCAGGGCCAG
CCCTTCACCA GCGTCACGAA ATACGTCCCC GGCGCCGACA TCTATCAGGC CGAGACGCGC
GAGCAGCTCG TCACCGTCGC GCCCGGCGCC ACGGCCGAAG TGAGCTCGCG CCTCTTCGCC
GGCGCGAAGG AATGGGAGAC GATCCGCGCC TACCAGAACG AGGGCGCGAC CGAGCCCACC
GAGGGGGCCG AGCCTATCCC GGGCTTCATC GACTCGATCG ACTGGGGCTG GTTCTTCTTC
CTGACCAAGC CGATCTTCAC GGTGCTGCAC TGGCTCAATC ACATGATCGG CAACATGGGT
CTTGCCATCA TCGCGCTGAC ATTCCTGCTC AAGGCGCTGG TGCTGCCGCT GGCCTACAAG
TCCTACGTCT CGATGGCCCG CATGAAGGAA CTGCAGCCCG AGCTCGAGGC GCTGCGCGAG
CGCGCCGGCG ACGACAAGAT GCTCATGCAG CGCGAGATGA TGCGGCTCTA CAAGGAGAAG
CAGGTGAACC CGGCCGCTGG CTGCCTGCCG ATCCTGATCC AGATCCCGAT CTTCTTCTCG
CTCTACAAGG TGATCTTCGT CACGATCGAG CTGCGCCATG CCCCCTTCTT CGGCTGGCTG
AAGGACCTGT CGGCGCCCGA TCCGTCCTCG ATCTTCAACT TCTTCGGCCT CGCCCCCTGG
GCCGCGCCGA CGCCCGGCAC GACGATGGCG CTGATCTTCA TCGGGGCTCT GCCGATCCTG
CTCGGCGTCT CGATGTGGCT GCAGCAGAAG CTGAACCCGG CACCCGGGGA CAAGGCGCAG
GCGATGATCT TCGCCTGGAT GCCCTGGGTC TTCATGTTCA TGCTCGGCCA CTTCGCCTCG
GGCCTGGTGC TCTACTGGAT CGTGAACAAC CTGATCACCT TCACCCAGCA GTATGTCATC
ATGCGCAGCC ACGGCCATCA CCCGGACATC TTCGGCAACA TCAAGGCCAG CTTCAGCCGC
AAGCCCGCGG CGCAGCCCGC CGGCAAGGCC GCGAACGACG GTGCGGCGCC GGCGAAGAAG
CGGAAACCAT GA
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| Protein sequence | MDDQNKNLIL ATGLSFLVIM VWFFLFPPPE AVTEGETTVA TQQTAVAPSA TPDAPTTAVP
PDAELPETQR VVIDTPRLQG SISMLGGRLD DLSLKSYHET LDPQSQIVRL LSPVGQPNAY
YALYGWTPAG ALGYEDVPGA NTTWTQVGSG ALGVDQPVTL QWDNGKGLVF TRTISVDDHY
MFSVAQTVEN NSGQAVQLAP YGIVARHGKP LNLQNFFVLH EGVVGRADGK LTETKYDKVA
ELPQVAREGA QAEVIDAQQD GWIGFTDKYW MTTLIPQQGQ PFTSVTKYVP GADIYQAETR
EQLVTVAPGA TAEVSSRLFA GAKEWETIRA YQNEGATEPT EGAEPIPGFI DSIDWGWFFF
LTKPIFTVLH WLNHMIGNMG LAIIALTFLL KALVLPLAYK SYVSMARMKE LQPELEALRE
RAGDDKMLMQ REMMRLYKEK QVNPAAGCLP ILIQIPIFFS LYKVIFVTIE LRHAPFFGWL
KDLSAPDPSS IFNFFGLAPW AAPTPGTTMA LIFIGALPIL LGVSMWLQQK LNPAPGDKAQ
AMIFAWMPWV FMFMLGHFAS GLVLYWIVNN LITFTQQYVI MRSHGHHPDI FGNIKASFSR
KPAAQPAGKA ANDGAAPAKK RKP
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