Gene Rsph17029_2580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_2580 
Symbol 
ID4897666 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009049 
Strand
Start bp2718168 
End bp2718593 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content66% 
IMG OID640113179 
Productbiopolymer transport protein ExbD/TolR 
Protein accessionYP_001044454 
Protein GI126463340 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0848] Biopolymer transport protein 
TIGRFAM ID[TIGR02803] TonB system transport protein ExbD, group 1 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.25042 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.920318 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGGGT TCCGCGGCAG CGACGGCGAC GATCTGAACC ACGAGATCAA CGTCACGCCC 
TTTATCGACG TGATCCTCGT GCTGCTCATC ATCTTCATGG TGGCGGCGCC GCTCTCGACG
GTGGATGTGC CGGTGGATCT GCCGGGCTCG ACGGCAAGCC AGAGCCAGCG GCCGGAAGAG
CCGATCTTCC TTTCGCTGCA GAAGGATCTG ACGCTCTCGC TGAAGAACAC GGCCATCGCG
CGCGAGGCGC TGCAGGCCGA TCTCGATGCG GCGACGGAAG GCAATCGCGA CACGCGGATC
TTCCTGCGCG CGGACGAGGC GGTGCCTTAC GGCGATCTGA TGGAGGTAAT GAACCTCCTG
CGCGGCGCGG GCTACCTGAA GGTGGCGCTG GTCGGGCTGG AGGCGCTTCC GGGAGGCACG
CCATGA
 
Protein sequence
MAGFRGSDGD DLNHEINVTP FIDVILVLLI IFMVAAPLST VDVPVDLPGS TASQSQRPEE 
PIFLSLQKDL TLSLKNTAIA REALQADLDA ATEGNRDTRI FLRADEAVPY GDLMEVMNLL
RGAGYLKVAL VGLEALPGGT P