Gene Rsph17029_2561 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_2561 
Symbol 
ID4897397 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009049 
Strand
Start bp2698671 
End bp2699315 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content72% 
IMG OID640113160 
ProductHAD family hydrolase 
Protein accessionYP_001044435 
Protein GI126463321 
COG category[R] General function prediction only 
COG ID[COG0637] Predicted phosphatase/phosphohexomutase 
TIGRFAM ID[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.467395 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.978444 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGAGG CGGTGATCTT CGACTGCGAC GGCGTGCTGG TGGACAGCGA ACCCACGGCC 
TTCGCGCTTC TGGGCGAGGA TCTCGCCCGC CACGGCCTTG CGCTCGATCA TGCGACGCTC
GAGGCGCATT TCCTCGGCGG CACCATTCCC GGCGCGGCCG TGACGGCCCG CCGTCTGGGG
GCAGACCTGC CCGCGGACTG GGTGGAGGAT TTCTACGAGC GGCTCTATGC GCGGCTGGCC
GAAGGCACGC CGCTCATCCC CCATGTCGAG GAGGTGGTGG CCGCGCTCGA TCAGGCGGGC
ATCCCCTATG CGGTGGGCTC GAACGGGTCC GACCGCAAGA TGCAGGTGAC GCTCGGCCAG
CATCCGGCCC TGATGGCGCG GCTCGACGGG CGGCTGTTCT CGGGCCAGTC GATGGATGCG
CCGAAGCCCG CGCCCGATCT CTATCTCCAT GCCGCCCGCG CGCTGGGGGT GGAGCCCGAC
CGCTGCGCGG TGATCGAGGA CAGCCCGACC GGCGCCCGCG CCGCCCGCGC CGCCGGCATG
ACCTGCTTCG GCTATGTGCC CGACGGCAGT CCGGAGGCGC TCGAGGCCGA GGGCGCGCGG
CCCTTCTCGG ACATGCGCGA ACTGCCTGCC CTCCTCGGTC TCTAG
 
Protein sequence
MIEAVIFDCD GVLVDSEPTA FALLGEDLAR HGLALDHATL EAHFLGGTIP GAAVTARRLG 
ADLPADWVED FYERLYARLA EGTPLIPHVE EVVAALDQAG IPYAVGSNGS DRKMQVTLGQ
HPALMARLDG RLFSGQSMDA PKPAPDLYLH AARALGVEPD RCAVIEDSPT GARAARAAGM
TCFGYVPDGS PEALEAEGAR PFSDMRELPA LLGL