| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_2542 |
|---|
| Symbol | |
|---|
| ID | 4895643 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17029 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009049 |
|---|
| Strand | + |
|---|
| Start bp | 2679424 |
|---|
| End bp | 2680296 |
|---|
| Gene Length | 873 bp |
|---|
| Protein Length | 290 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640113141 |
|---|
| Product | dihydrodipicolinate synthase |
|---|
| Protein accession | YP_001044416 |
|---|
| Protein GI | 126463302 |
|---|
| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
|---|
| TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0922563 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCAGAG GGTCCATTCC TGCCCTTGTG ACGCCGTTCA AGAACGGCGA GCTGGATCTG
GACACGCTGA AGAAGCTGGT CGACTGGCAG ATCGCCGAAG GCTCGACCGG CCTCGTCCCG
GTGGGCACCA CGGGCGAGAG CCCGACGCTC AGCCACGAAG AGCACGAGAC GGTGATCGAG
GCGGTGGTGA AGGCCGCCGC AGGCCGGGTG CCGGTGATCG CGGGCGCGGG CTCGAACTCG
ACCGCCGAGG GGATCCGGCT GATCCGTTTC GCCGAGACCG TGGGCGCCGA TGCGGCGCTC
GTGGTGACGC CCTACTACAA CAAGCCCACG CAGGCCGGGA TGATCGCGCA TTTCACCGCG
CTCCACGACT GCTGCAGCCT GCCCATCGTG ATCTACAACA TCCCCGGCCG GTCGGTCGTC
GACATGTCGC CCGAGACGAT GGGCACGCTG GCGCGGCTGC CGCGGATCGT GGGCGTGAAG
GATGCCACCG GCAAGATCGA GCGGGTGAGC CAGCAGCGCG CCTCCTGCGG GCCGGACTTC
ATCCAGCTCT CGGGCGAGGA TGCGACGGCG CTCGGCTTCA ACGCCCACGG CGGCGTGGGC
TGCATCTCGG TCACGGCCAA CGTGGCGCCG CGGCTCTGCG CCGAGTTCCA GCAGGCAACC
CTCGCGGGCG ACTTCGCCAA GGCGCTGGAG TATCAGGACC GGCTGATGCC GCTGCATGAG
GCGATCTTCC TCGAGCCGGG GCTGGTGGGG GCGAAATATG CGCTCTCGAA GCTCGGGCTC
TGCTCCGACG AGGTGCGCCT GCCGCTCGTG GGCCTGACCG ACGCGACCAA GGCCCGCATC
GAGGCGGCCA TGCGTCACGC CGGCCTGATC TGA
|
|---|
| Protein sequence | MIRGSIPALV TPFKNGELDL DTLKKLVDWQ IAEGSTGLVP VGTTGESPTL SHEEHETVIE
AVVKAAAGRV PVIAGAGSNS TAEGIRLIRF AETVGADAAL VVTPYYNKPT QAGMIAHFTA
LHDCCSLPIV IYNIPGRSVV DMSPETMGTL ARLPRIVGVK DATGKIERVS QQRASCGPDF
IQLSGEDATA LGFNAHGGVG CISVTANVAP RLCAEFQQAT LAGDFAKALE YQDRLMPLHE
AIFLEPGLVG AKYALSKLGL CSDEVRLPLV GLTDATKARI EAAMRHAGLI
|
|---|
| |