| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_2541 |
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| Symbol | |
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| ID | 4895540 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009049 |
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| Strand | - |
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| Start bp | 2677310 |
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| End bp | 2679343 |
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| Gene Length | 2034 bp |
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| Protein Length | 677 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 640113140 |
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| Product | lytic transglycosylase, catalytic |
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| Protein accession | YP_001044415 |
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| Protein GI | 126463301 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00863759 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTCCCCAA GCCACGGCGC GCTCGTCAGC TTGTGTGTTG CGGGCGGGCA CGGGCTTGGG
CAGATTGCGC GCATGTCGCG CCCCAGATCC GCCCCCGCCC GTCTCCGCCT CGCCCTTCTG
CTGATCCTGC CGCTGCTCTG TGCGCCCCTT GCGGCGCGGG CCGAGGATCC GGCCGCGCTG
AAGGACGCGC TCCGCGCCGC CTGGTCGAAG GACTGGAGCG GTGCCGAGGC GCAGGCGCGC
CGGTCGGGCC CGCTCGCGCG GTCGCTCGTC GAATGGCACC GGCTGCGGGC GGGCGAGGGC
AGCCTGACCG ACTACGAGGC CTTCCTCGCG CAGCATCCCG ACTGGCCGGG GCTGAAGCTC
CTGCGCGACA AGGGCGAGGA GGCGGTGGCC CGCTCGGCCA CGCCCGCACG CGTGATCGCC
TGGTTCGGCT CGCGTCCGCC CGCGACCGCC ACCGGGGCCA TCGCGCTCGC CCGCGCCCAC
GCCGCAGCGG GCCAGCAGCC CGAGGCCGAG ACGGTGATCC GCCGCGCCTG GACGACGCTC
GCCTTCGACG CGGAGGAGGA ATCGGCCGCC ATCGGCGCCT TCCCCGAGGT GCTGGCCCGG
GCGCACGAGG CGCGGCTCGA CATGCTGCTC TGGGAGAACC GGCCCGAGCA GGCGCGGCGG
ATGCTGCCGC GCGTGTCGGA CGGCTGGAAG CGGCTGGCGG CGGCGCGGAT GGCGCTGCGC
GCCGATGCCG ACGGGGTGGA CGGGCTGATC GCGGCCGTGC CCGCGGCGCT CGCCGCCGAT
CCCGGCCTCG CCTACGAGCG GTTCCTCTGG CGGGCGCGCA AGGGCCGCGA CGCCGATGCG
GCGCAGCTGC TTCTGGAGCG GTCGGCCAGC GTGGCGGGCC TCGGCAGCCC CTCGGCCTGG
GCGGGGCGGC GGGCGGTGCT GGCGCGGGCC CTGAACGAGG AGGGCGATCC GAAGACCGCC
TACCGCATCG CCGCGAGCCA CCATCTCGAG GGCGGGGGCG ACTTTGCCGA GCTCGAGTTC
TTCGCGGGCT TCATCGCGCT GCGCAAGCTC GGCGACCCGG CCGCGGCGCT TCGGCATTTC
CAGCGGCTGC AGGCGGCGGT GCGCACGCCG ATCAGCCTCT CGCGGGCGCA TTACTGGCAG
GGTCGAGCGC TCGAGCAGCT CGGACGCTAC GACGAGGCGG GCGCGGCCTT CGCGGCGGGG
GCGCGCTATC AGACCGCCTA TTACGGGCTG CTCTCCGCCG AGCGCGCGGG CATCCCGCTC
GATCCTGCGC TCGTCTCGGC GCCGCGGGCG GGCGACTGGC GGCAGGCGGG CTTCGCCTCC
TCCTCGGTGC TGGCGGCGGG GCGGCTCCTT CTCGCGGCGG GCGAGCGCGA TCTCGGCAAG
CGGTTCCTGC TGCATCTGGC CGAGAGCCTG AAGGCCCCGG ACCTCGAGCG GTTATCCGAG
ATGGCGCTCG AGATGGGCGA GCCGCATGTG GCGGTGCTGA TCGCCAAGCA GGCCGCCGAG
GACGGCACGA TCCTGCCGCG GGCCTATTTC CCGGTGCCGG ATCTCGTGCC GGGCGACGGG
CTGCCGGTGA GCCGGGCGCT GGCTTTGTCG ATCGCGCGGC GCGAGAGCGA GTTCAACCCG
GTGGTGGTGA GCCCGGCCGG CGCACGCGGC CTCATGCAGG TCATGCCGGG GACGGCGAAG
CTCATGGCGC CCAAGGTGGG GCTCGGCTAC GAGCCTGCGA AGCTCACGCA GGATCCGGCT
TACAACGTGC GGCTCGGCAC GGCCTATCTC GCGCAGCTGG TCGAGGAGTT CGGCCCGTCG
CTTGCGCTGG TGGCCTCGGG CTACAATGCG GGCCCGGGCC GCCCGCGCCG CTGGGTGACC
GAATTCGGCG ACCCGCGTGC CGAGGATGTG GATGCGGTGG ACTGGGTGGA GCAGATCCCC
TTCTCCGAGA CCCGCACCTA CGTCATGCGC GTGACCGAGT CGGTGGTGAT CTACCGCGCC
AAGCTCCGCG GCAGCGGCGG CCCCGTCCGC ATCACCCCCG AGCTGAAGGG GTGA
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| Protein sequence | MSPSHGALVS LCVAGGHGLG QIARMSRPRS APARLRLALL LILPLLCAPL AARAEDPAAL
KDALRAAWSK DWSGAEAQAR RSGPLARSLV EWHRLRAGEG SLTDYEAFLA QHPDWPGLKL
LRDKGEEAVA RSATPARVIA WFGSRPPATA TGAIALARAH AAAGQQPEAE TVIRRAWTTL
AFDAEEESAA IGAFPEVLAR AHEARLDMLL WENRPEQARR MLPRVSDGWK RLAAARMALR
ADADGVDGLI AAVPAALAAD PGLAYERFLW RARKGRDADA AQLLLERSAS VAGLGSPSAW
AGRRAVLARA LNEEGDPKTA YRIAASHHLE GGGDFAELEF FAGFIALRKL GDPAAALRHF
QRLQAAVRTP ISLSRAHYWQ GRALEQLGRY DEAGAAFAAG ARYQTAYYGL LSAERAGIPL
DPALVSAPRA GDWRQAGFAS SSVLAAGRLL LAAGERDLGK RFLLHLAESL KAPDLERLSE
MALEMGEPHV AVLIAKQAAE DGTILPRAYF PVPDLVPGDG LPVSRALALS IARRESEFNP
VVVSPAGARG LMQVMPGTAK LMAPKVGLGY EPAKLTQDPA YNVRLGTAYL AQLVEEFGPS
LALVASGYNA GPGRPRRWVT EFGDPRAEDV DAVDWVEQIP FSETRTYVMR VTESVVIYRA
KLRGSGGPVR ITPELKG
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