Gene Rsph17029_2309 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_2309 
Symbol 
ID4895954 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009049 
Strand
Start bp2441311 
End bp2443089 
Gene Length1779 bp 
Protein Length592 aa 
Translation table11 
GC content67% 
IMG OID640112905 
ProductTrkA domain-containing protein 
Protein accessionYP_001044183 
Protein GI126463069 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0471] Di- and tricarboxylate transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.887231 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.094745 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGGCT TCGAGATGTC GGAACCGATG CAGGCCTGGA CGGCGCTCGC GATCCTCGCC 
GGGATGCTCG TGCTCTTCGT CCGCGAGATC TATCCGGTCG AGGTGACGGC CCTTGCGGGC
GGCGCGCTCA TGCTGGCAGT GGGCATCCTG CCGCAGGACG ACCTTCTGGG GGTGCTTTCC
AACCCCGCGC CCTGGACCAT CACGGCGCTC TTCATCATCG TGGGATCGCT GGTGCGCACC
GGCACCCTCG ATGCCGTGAC CCAGATCGCC GTCCGCCATG CGGCGACGCG GCCCCTGCGC
ACCCTCGCTC TCCTGTCGCT GGTGATCGTG GGCATGTCGG CCTTCATGAA CAACACGCCC
ATCGTGGTGG TGATGATCCC GGTCTTCATG CAGATCGCGC GGCAGATGCA AGTCTCGCCC
TCCAAGGTCA TGATCCCGCT CAGCTATCTG TCGATCTTCG GCGGCACCGT GACGCTGATC
GGCACCTCCA CGAACCTGCT GGTCGACGGG GTGGCGCGCC GGTCGGGCCT CGAGCCCTTC
TCGATCTTCG AGATCACGCC GCTGGGCCTG ACCCTCGCGG CCGTGGGCCT GGGCTATCTC
TGGCTCTTCG CGCCGCGCCT GCTGGCCGAC CGCGACAGCA TGGGGATGCT GCTCTCGGAC
CGGAGCCGGA TGAAGTTCTT CACCGAGGTG GCCGTTCCCG AGGGCTCGGC CCTGATCGGC
CGCAAGGTCG AGGATGTGGA AATCTTCAAG CGCGACAGCC TGCGCGTGAT CGACGTGCTG
CGCGGCGACA TTTCCCTGCG CCGCAACTTG GCCGAGGCAA CGCTCGAGGC CGGAGACCGG
GTGGTGCTGC GCACCCCTAT GTCCGAGGTG CTGAGCCTGC AGTCGAACAA GGAGCTGCGG
CTCGTCGACA AGCTCTCGTC AGTGCAGACG CAGGTGGTCG AGGTGCTCAT CACGCCCGGC
TGCTTCATGG TGGGCCGCTC GCTCGGCGCC ATGCGCCTCA GGCGGCGCTA CGGGGTCTAT
GTGCTGGCCG CGCACCGGCG CAACCAGAAC ATCGGCCGCC AGCTCGACGA TCTCGTGGTG
CAGGTGGGCG ACACGCTTCT CCTGGAGGGG GCGCAGGCCG ATATCGAGCG GCTGGCCTCG
GAGATGCAGG TGGTCGACAT CGCCCAGCCG TCGGACCGGG CCTACCGGCG CAACCGCGCG
CCCGTGGTGA TGGCGGTTCT GGCGGCGGTG GTGCTGCTGT CGGCCTTCGA CGTGGCGCCC
ATCGCGATCC TTGCCATGAT CGGCGTGGCG GTCGTGCTCG TCACCCGCTG CATCGATGCC
GACGAGGCCT TCGGCTATAT CGAGGGGCGG CTGCTCGCGC TCATCTTCGG GATGCTGGCG
GTGGGGGCGG GGCTCGAACA TTCCGGCGCG GTCGAGATGG TCGTGGGTGC CGTGGCCCCG
TGGATGCAGG GGCTGCCGCC CTTCGCACTG ATCTTCGTGG TCTATGCGCT GACCTCGATC
CTGACCGAGC TCGTCAGCAA CAATGCCGTG GCGGTGATCC TCACCCCCAT CGTGATCGGC
CTTGCGGGAT CCCTGGGCGT CGATCCGCGG CCCTTCGTGG TCGCGGTCAT GTTCGGCGCC
TCGGCGAGCT TCGCCACGCC CATCGGCTAT CAGACGAACA CGCTCGTCTA CGGGCCGGGC
GGCTACCGCT TCACCGACTT CCTGCGCATC GGCGTGCCGC TGAACATCCT GATGATGGTG
GTCATGAGCC TCCTCATCCC GGTCTTTTTC CCCTTCTGA
 
Protein sequence
MFGFEMSEPM QAWTALAILA GMLVLFVREI YPVEVTALAG GALMLAVGIL PQDDLLGVLS 
NPAPWTITAL FIIVGSLVRT GTLDAVTQIA VRHAATRPLR TLALLSLVIV GMSAFMNNTP
IVVVMIPVFM QIARQMQVSP SKVMIPLSYL SIFGGTVTLI GTSTNLLVDG VARRSGLEPF
SIFEITPLGL TLAAVGLGYL WLFAPRLLAD RDSMGMLLSD RSRMKFFTEV AVPEGSALIG
RKVEDVEIFK RDSLRVIDVL RGDISLRRNL AEATLEAGDR VVLRTPMSEV LSLQSNKELR
LVDKLSSVQT QVVEVLITPG CFMVGRSLGA MRLRRRYGVY VLAAHRRNQN IGRQLDDLVV
QVGDTLLLEG AQADIERLAS EMQVVDIAQP SDRAYRRNRA PVVMAVLAAV VLLSAFDVAP
IAILAMIGVA VVLVTRCIDA DEAFGYIEGR LLALIFGMLA VGAGLEHSGA VEMVVGAVAP
WMQGLPPFAL IFVVYALTSI LTELVSNNAV AVILTPIVIG LAGSLGVDPR PFVVAVMFGA
SASFATPIGY QTNTLVYGPG GYRFTDFLRI GVPLNILMMV VMSLLIPVFF PF