Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_2309 |
Symbol | |
ID | 4895954 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009049 |
Strand | - |
Start bp | 2441311 |
End bp | 2443089 |
Gene Length | 1779 bp |
Protein Length | 592 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640112905 |
Product | TrkA domain-containing protein |
Protein accession | YP_001044183 |
Protein GI | 126463069 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0471] Di- and tricarboxylate transporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.887231 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.094745 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCGGCT TCGAGATGTC GGAACCGATG CAGGCCTGGA CGGCGCTCGC GATCCTCGCC GGGATGCTCG TGCTCTTCGT CCGCGAGATC TATCCGGTCG AGGTGACGGC CCTTGCGGGC GGCGCGCTCA TGCTGGCAGT GGGCATCCTG CCGCAGGACG ACCTTCTGGG GGTGCTTTCC AACCCCGCGC CCTGGACCAT CACGGCGCTC TTCATCATCG TGGGATCGCT GGTGCGCACC GGCACCCTCG ATGCCGTGAC CCAGATCGCC GTCCGCCATG CGGCGACGCG GCCCCTGCGC ACCCTCGCTC TCCTGTCGCT GGTGATCGTG GGCATGTCGG CCTTCATGAA CAACACGCCC ATCGTGGTGG TGATGATCCC GGTCTTCATG CAGATCGCGC GGCAGATGCA AGTCTCGCCC TCCAAGGTCA TGATCCCGCT CAGCTATCTG TCGATCTTCG GCGGCACCGT GACGCTGATC GGCACCTCCA CGAACCTGCT GGTCGACGGG GTGGCGCGCC GGTCGGGCCT CGAGCCCTTC TCGATCTTCG AGATCACGCC GCTGGGCCTG ACCCTCGCGG CCGTGGGCCT GGGCTATCTC TGGCTCTTCG CGCCGCGCCT GCTGGCCGAC CGCGACAGCA TGGGGATGCT GCTCTCGGAC CGGAGCCGGA TGAAGTTCTT CACCGAGGTG GCCGTTCCCG AGGGCTCGGC CCTGATCGGC CGCAAGGTCG AGGATGTGGA AATCTTCAAG CGCGACAGCC TGCGCGTGAT CGACGTGCTG CGCGGCGACA TTTCCCTGCG CCGCAACTTG GCCGAGGCAA CGCTCGAGGC CGGAGACCGG GTGGTGCTGC GCACCCCTAT GTCCGAGGTG CTGAGCCTGC AGTCGAACAA GGAGCTGCGG CTCGTCGACA AGCTCTCGTC AGTGCAGACG CAGGTGGTCG AGGTGCTCAT CACGCCCGGC TGCTTCATGG TGGGCCGCTC GCTCGGCGCC ATGCGCCTCA GGCGGCGCTA CGGGGTCTAT GTGCTGGCCG CGCACCGGCG CAACCAGAAC ATCGGCCGCC AGCTCGACGA TCTCGTGGTG CAGGTGGGCG ACACGCTTCT CCTGGAGGGG GCGCAGGCCG ATATCGAGCG GCTGGCCTCG GAGATGCAGG TGGTCGACAT CGCCCAGCCG TCGGACCGGG CCTACCGGCG CAACCGCGCG CCCGTGGTGA TGGCGGTTCT GGCGGCGGTG GTGCTGCTGT CGGCCTTCGA CGTGGCGCCC ATCGCGATCC TTGCCATGAT CGGCGTGGCG GTCGTGCTCG TCACCCGCTG CATCGATGCC GACGAGGCCT TCGGCTATAT CGAGGGGCGG CTGCTCGCGC TCATCTTCGG GATGCTGGCG GTGGGGGCGG GGCTCGAACA TTCCGGCGCG GTCGAGATGG TCGTGGGTGC CGTGGCCCCG TGGATGCAGG GGCTGCCGCC CTTCGCACTG ATCTTCGTGG TCTATGCGCT GACCTCGATC CTGACCGAGC TCGTCAGCAA CAATGCCGTG GCGGTGATCC TCACCCCCAT CGTGATCGGC CTTGCGGGAT CCCTGGGCGT CGATCCGCGG CCCTTCGTGG TCGCGGTCAT GTTCGGCGCC TCGGCGAGCT TCGCCACGCC CATCGGCTAT CAGACGAACA CGCTCGTCTA CGGGCCGGGC GGCTACCGCT TCACCGACTT CCTGCGCATC GGCGTGCCGC TGAACATCCT GATGATGGTG GTCATGAGCC TCCTCATCCC GGTCTTTTTC CCCTTCTGA
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Protein sequence | MFGFEMSEPM QAWTALAILA GMLVLFVREI YPVEVTALAG GALMLAVGIL PQDDLLGVLS NPAPWTITAL FIIVGSLVRT GTLDAVTQIA VRHAATRPLR TLALLSLVIV GMSAFMNNTP IVVVMIPVFM QIARQMQVSP SKVMIPLSYL SIFGGTVTLI GTSTNLLVDG VARRSGLEPF SIFEITPLGL TLAAVGLGYL WLFAPRLLAD RDSMGMLLSD RSRMKFFTEV AVPEGSALIG RKVEDVEIFK RDSLRVIDVL RGDISLRRNL AEATLEAGDR VVLRTPMSEV LSLQSNKELR LVDKLSSVQT QVVEVLITPG CFMVGRSLGA MRLRRRYGVY VLAAHRRNQN IGRQLDDLVV QVGDTLLLEG AQADIERLAS EMQVVDIAQP SDRAYRRNRA PVVMAVLAAV VLLSAFDVAP IAILAMIGVA VVLVTRCIDA DEAFGYIEGR LLALIFGMLA VGAGLEHSGA VEMVVGAVAP WMQGLPPFAL IFVVYALTSI LTELVSNNAV AVILTPIVIG LAGSLGVDPR PFVVAVMFGA SASFATPIGY QTNTLVYGPG GYRFTDFLRI GVPLNILMMV VMSLLIPVFF PF
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