| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_2301 |
|---|
| Symbol | |
|---|
| ID | 4896628 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17029 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009049 |
|---|
| Strand | - |
|---|
| Start bp | 2433986 |
|---|
| End bp | 2434597 |
|---|
| Gene Length | 612 bp |
|---|
| Protein Length | 203 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 640112897 |
|---|
| Product | thiamine-phosphate pyrophosphorylase |
|---|
| Protein accession | YP_001044175 |
|---|
| Protein GI | 126463061 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0352] Thiamine monophosphate synthase |
|---|
| TIGRFAM ID | [TIGR00693] thiamine-phosphate pyrophosphorylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.127394 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCTCT CGCTCTATTT CGTGACGCCG GACGGGGCCG AGGGTCTCGA GCAGCTGGTG
GCGGCGGCTG TCCGGGGAGG GGCCACGCTC GTCCAGCTCC GCGACAAGCA CCGCTCCGAC
GCGGAGCTGA TCCCGCTCGC GCGGCGACTG GTGGCGGCGC TCGACGCCCA AGGCGTGCCG
CTCATCGTGA ACGACCGGAT CGAGGTGGTG CTGGCCTCGG GGGCGGCGGG GCTTCATGTG
GGGCAGGGCG ATCTGGGCGT GGCCGAAGCG CGGCGCCGGA TCGGGCCCGA CCGTCTCCTC
GGCCTCTCGG TCGAGGCGCC GGAGCATCTG GAGGCGCTGC CCCTCGGGAT CGTCGATTAT
GTGGGGGCGG GGCCTGTGCG GGCCACGGCC TCGAAGCCCG ACCATGCGCC GCCCATCGGC
TTCGAGGGGC TTGCGCGGCT GGTGGCAGCG GCACCCGTCC CGGCGGTCGC CATCGGCGGG
CTGGGCGCGG GGGATGCCCA CGCGGTGAAG GCCGCGGGCG CGGCCGGCAT GGCCATCGTC
TCGGCCATCG GCGCGGCCGC GGATCCGGAG GCCGCCGCCC GGGCGCTGGC GCTCGAATGG
GGGCGCGCAT GA
|
|---|
| Protein sequence | MNLSLYFVTP DGAEGLEQLV AAAVRGGATL VQLRDKHRSD AELIPLARRL VAALDAQGVP
LIVNDRIEVV LASGAAGLHV GQGDLGVAEA RRRIGPDRLL GLSVEAPEHL EALPLGIVDY
VGAGPVRATA SKPDHAPPIG FEGLARLVAA APVPAVAIGG LGAGDAHAVK AAGAAGMAIV
SAIGAAADPE AAARALALEW GRA
|
|---|
| |