Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_2202 |
Symbol | |
ID | 4896311 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009049 |
Strand | + |
Start bp | 2333353 |
End bp | 2334006 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 640112796 |
Product | dTMP kinase |
Protein accession | YP_001044077 |
Protein GI | 126462963 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0125] Thymidylate kinase |
TIGRFAM ID | [TIGR00041] thymidylate kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0588786 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCGCGC AGGGCTTCTT TCTCGCGGTC GAGGGGATCG ACGGCTCCGG CAAGTCCGGG ATCGTCCGGT CTCTGGCCGC GCATCTCGGA GCGGAGGGCC GCGACGTGCT CGTCACGCGC GAGCCGGGCG GCACCCCCGA AGGCGAGGCC ATCCGCGGGC TGGTGCTCGC CGGCGCCGAC GAGGCGTGGG ATCCGATGGC GGAGCTCCTG CTGATGACCG CCGCGCGCGT CCAGCATGTC CGCCGCGTTA TCGCGCCTGC GCTGGCGCAG GGTCGGGTCG TGATCTCGGA CCGCTATGCG GGCTCGACGC TGGCCTATCA GGGCACCGGG CGCGGCCTCT CCGAGGCGTT CATCCGCACG CTCCATGCCG AGGCCACGGG CGATCTCTGG CCGGATCTGA CGCTCGTCCT CGATCTCGAG GCGGGCATCG GCCTCGCCCG CAGCCGCCGG AGGCTCACCG GCGAGACGCT CGACGAAGGC CGTTTCGAGA GCCTCGATCT GGCCTTCCAC GAGCGCATCC GCGCGGCCTT CCTCGCGCAG GCGGCCCGCG ACCCCGGCCG CCATGCGGTG ATCGATGCCT CGGGCACGCC CGAGGAGGTG CAGGCCCGGG CCTGCGCGGC GCTGGCGCCG TTCCTCGCGC AGGCGCCGGT CTAG
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Protein sequence | MGAQGFFLAV EGIDGSGKSG IVRSLAAHLG AEGRDVLVTR EPGGTPEGEA IRGLVLAGAD EAWDPMAELL LMTAARVQHV RRVIAPALAQ GRVVISDRYA GSTLAYQGTG RGLSEAFIRT LHAEATGDLW PDLTLVLDLE AGIGLARSRR RLTGETLDEG RFESLDLAFH ERIRAAFLAQ AARDPGRHAV IDASGTPEEV QARACAALAP FLAQAPV
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