| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_2147 |
|---|
| Symbol | |
|---|
| ID | 4896867 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17029 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009049 |
|---|
| Strand | + |
|---|
| Start bp | 2277591 |
|---|
| End bp | 2279381 |
|---|
| Gene Length | 1791 bp |
|---|
| Protein Length | 596 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640112741 |
|---|
| Product | nickel-dependent hydrogenase, large subunit |
|---|
| Protein accession | YP_001044022 |
|---|
| Protein GI | 126462908 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0374] Ni,Fe-hydrogenase I large subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0605986 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.266797 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTCGCGA CACCGAACGG TTTCAACCTG GACAACACCG GCCGCCGCAT CGTGGTGGAC
CCGGTGACCC GGATCGAGGG TCACATGCGC TGCGAAGTGA ACGTGGACGA CCAGGGCATC
ATCCGTAATG CCGTCTCGAC GGGAACCATG TGGCGCGGCC TCGAGGTCAT CCTCAAGGGC
CGCGACCCGC GCGACGCCTG GGCCTTCACC GAGCGGATCT GCGGGGTCTG CACCGGCACC
CATGCACTCA CCTCCGTCCG CGCGGTCGAG GATGCGCTGG GGATCTCGAT CCCCGACAAT
GCGAACTCGA TCCGCAACAT GATGCAGCTG AACCTGCAGA TCCACGACCA CATCGTCCAT
TTCTACCATC TGCACGCGCT GGACTGGGTG AACCCGGTCA ATGCGCTGCG CGCCGATCCC
AAGGCCACGT CCGAGCTGCA GCAGAAGGTC TCGCCTTCGC ACCCGCTCTC GTCGCCGGGC
TATTTCCGCG ACGTGCAGAA CCGGCTGAAG AAATTCGTGG AATCGGGGCA GCTCGGCCTG
TTCAAGAACG GCTACTGGGA CAATCCGGCC TATCTGCTGC CGCCCGAGGC GGACCTGATG
GCCACGACCC ACTATCTCGA GGCGCTCGAC CTGCAGAAGG AGATCGTGAA GGTCCACACG
ATCTTCGGCG GCAAGAACCC GCATCCGAAC TGGCTGGTGG GGGGCGTGCC CTGCCCGATC
AACATCGACG GCGTGGGCGC GGTCGGCGCG ATCAACATGG AGCGTCTGAA CCTCGTCTCC
TCGATCATCG ACCAGTGCAT CCAGTTCACC AACAACGTCT ATCTGCCCGA CGTGGTGGCC
ATCGGCGGCT TCTACCGCAA CTGGCTCTAT GGCGGCGGGC TCTCGTCGAA GTCGGTGATG
GCCTATGGCG ACATCCCCGA GCATCCGAAC GATTTCTCGC CCGAACAGCT CCATCTGCCG
CGGGGGGCGA TCATCAACGG CAATCTCGAG GAAGTGCATG ACGTCGATCC GCGCGACCCC
GAGCAGGTGC AGGAATTCGT CGATCACTCC TGGTATGCCT ATGGCGAGCC GGGGCGCGGG
CTGCACCCCT GGGACGGCGT GACCGAGCCG CGCTACGAGC TCGGCCCCAA TGCCAAGGGC
ACGCGGACGA ACATCCTCGA GCTCGACGAG GCGGCGAAAT ATTCCTGGAT CAAGGCGCCG
CGCTGGAAGG GTCACGCGAT GGAGGTGGGC CCGCTCGCCC GCTACATCGT GGGCTATGCC
AAGGGCCACG AGGACATCAA GAACCAGGTC GAGGGTCTCT TGCGCACCAT GGACCTGCCG
GTCTCGGCAC TGTTCTCGAC GCTGGGCCGC ACGGCCGCCC GCGCGCTCGA GGCGGAATAC
TGCTGCCGCC TGCAGAAGCA CTTCTTCGAC AAGCTCATCA CCAACGTGAA GAACGGCGAC
AGCAGCACCG CCAATGTCGA GAAGTGGGAG CCGCGCACCT GGCCGAAGGA GGCCAAGGGC
GTCGGCATGA CCGAGGCCCC GCGCGGCGCG CTCGGCCACT GGATCCGCAT CAAGGACGGC
CGGATCGAGA ACTATCAGTG CGTGGTGCCC ACCACCTGGA ACGGCAGCCC GCGCGACGCG
GCCGGCAACA TCGGCGCCTT CGAGGCGAGC CTGCTCGACA CCAAGATGGA GCGCCCCGAG
GAGCCGGTCG AGATCCTGCG CACGCTGCAC TCTTTCGACC CCTGCCTCGC CTGCTCCACC
CATGTCCTGT CGCCGGACGG CCAGGAACTC ACCACCGTCA AGGTCCGCTG A
|
|---|
| Protein sequence | MVATPNGFNL DNTGRRIVVD PVTRIEGHMR CEVNVDDQGI IRNAVSTGTM WRGLEVILKG
RDPRDAWAFT ERICGVCTGT HALTSVRAVE DALGISIPDN ANSIRNMMQL NLQIHDHIVH
FYHLHALDWV NPVNALRADP KATSELQQKV SPSHPLSSPG YFRDVQNRLK KFVESGQLGL
FKNGYWDNPA YLLPPEADLM ATTHYLEALD LQKEIVKVHT IFGGKNPHPN WLVGGVPCPI
NIDGVGAVGA INMERLNLVS SIIDQCIQFT NNVYLPDVVA IGGFYRNWLY GGGLSSKSVM
AYGDIPEHPN DFSPEQLHLP RGAIINGNLE EVHDVDPRDP EQVQEFVDHS WYAYGEPGRG
LHPWDGVTEP RYELGPNAKG TRTNILELDE AAKYSWIKAP RWKGHAMEVG PLARYIVGYA
KGHEDIKNQV EGLLRTMDLP VSALFSTLGR TAARALEAEY CCRLQKHFFD KLITNVKNGD
SSTANVEKWE PRTWPKEAKG VGMTEAPRGA LGHWIRIKDG RIENYQCVVP TTWNGSPRDA
AGNIGAFEAS LLDTKMERPE EPVEILRTLH SFDPCLACST HVLSPDGQEL TTVKVR
|
|---|
| |