| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_2146 |
|---|
| Symbol | |
|---|
| ID | 4897103 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17029 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009049 |
|---|
| Strand | + |
|---|
| Start bp | 2276478 |
|---|
| End bp | 2277587 |
|---|
| Gene Length | 1110 bp |
|---|
| Protein Length | 369 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640112740 |
|---|
| Product | hydrogenase (NiFe) small subunit HydA |
|---|
| Protein accession | YP_001044021 |
|---|
| Protein GI | 126462907 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1740] Ni,Fe-hydrogenase I small subunit |
|---|
| TIGRFAM ID | [TIGR00391] hydrogenase (NiFe) small subunit (hydA)
[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.206578 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.329607 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCCCCAGA TCGAAACCTT CTACGATGTG ATGCGCCGCC AGGGGATCAC CCGGCGCAGC
TTCATGAAAT ACTGCTCGCT CACCGCGGCG GCGCTGGGGC TCGGCCCTTC CTTCGTGCCG
AAGATCGCGC ATGCGATGGA GACGAAGCCC CGCACGCCGG TGATCTGGGT CCACGGGCTC
GAATGCACCT GCTGCTCGGA GAGCTTCATC CGCGCGGCCC ATCCGCTGGC CAAGGACGTC
GTCCTGTCGA TGATCTCGCT CGACTATGAC GACACGCTGA TGGCGGCGGC GGGCCATCAG
GCCGAAGCCG CGCTGATGGA CACGATCGAG AAATACAAGG GCAACTACAT CCTTGCCGTC
GAGGGCAACC CGCCGCTGAA CGAGGACGGG ATGTACTGCA TCATCGGGGG CAAGCCCTTC
GTCGAGCAGC TGAAGATGGC GGCCGAGCAC GCCAAGGCCA TCATCAGCTG GGGGGCCTGC
GCCTCCTACG GCTGCGTGCA GGCGGCCGCG CCCAACCCGA CGCGGGCCAC GCCCGTGCAC
AAGGTCATCC TCGACAAGCC GATCATCAAG GTGCCGGGCT GCCCGCCCAT CGCCGAAGTC
ATGACCGGCG TCATCACCTA CATGCTGACC TTCGACCGTC TGCCCGAGCT CGACCGTCAG
GGCCGCCCGG CGATGTTCTA CAGCCAGCGC ATCCACGACA AATGCTACCG CCGCCCGCAT
TTCGACGCGG GCCAGTTCGT CGAGGCCTGG GACGACGACT ACGCCAAGAA GGGCTACTGC
CTCTACAAGA TGGGCTGCAA GGGCCCGACC ACCTACAACG CCTGCTCGAC CGTGCGCTGG
AACGAGGGCG TGAGCTTCCC GATCCAGTCC GGCCACGGCT GCATCGGCTG CTCGGAGGAC
GGCTTCTGGG ATCAGGGGTC CTTCTACGAC CGGCTGACCA CCATCAAGCA GTTCGGCGTC
GAGGCCAATG CCGACACGAT CGGCCTCACG GCCGTGGGCG CGCTCGGCGC GGGCGTGGCG
GCCCATATCG CGGCCACCGC CCTCAAGAGC GCGCAGAAGA AATCGCAGGC GGCCAATACC
GCGAAGACAG ACGAAAAGAC GGAGGCCTGA
|
|---|
| Protein sequence | MPQIETFYDV MRRQGITRRS FMKYCSLTAA ALGLGPSFVP KIAHAMETKP RTPVIWVHGL
ECTCCSESFI RAAHPLAKDV VLSMISLDYD DTLMAAAGHQ AEAALMDTIE KYKGNYILAV
EGNPPLNEDG MYCIIGGKPF VEQLKMAAEH AKAIISWGAC ASYGCVQAAA PNPTRATPVH
KVILDKPIIK VPGCPPIAEV MTGVITYMLT FDRLPELDRQ GRPAMFYSQR IHDKCYRRPH
FDAGQFVEAW DDDYAKKGYC LYKMGCKGPT TYNACSTVRW NEGVSFPIQS GHGCIGCSED
GFWDQGSFYD RLTTIKQFGV EANADTIGLT AVGALGAGVA AHIAATALKS AQKKSQAANT
AKTDEKTEA
|
|---|
| |