Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_2133 |
Symbol | |
ID | 4897651 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009049 |
Strand | - |
Start bp | 2261623 |
End bp | 2262348 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640112727 |
Product | 2-deoxy-D-gluconate 3-dehydrogenase |
Protein accession | YP_001044008 |
Protein GI | 126462894 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | [TIGR01832] 2-deoxy-D-gluconate 3-dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.617453 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATCTCCT TCTCGCTCGA GGGCCAGCGC GCGCTGGTGA CCGGCGCCAA CACCGGGATC GGACAGGCGA TCGCGGTGGG TCTGGCCGGG GCGGGGGCCG AGGTGATCGC CGCCGGCCGC TCCTCCTGCG CCGAGACGGT GGCCATGACC GGCGGGCGCG AGCTGCGGCT CGACTTCGCC GACCCGATGG CCGCGCGCGA CGTGTTCGAG GCCGAGCGCA TCGACATTCT CGTGAACAAC GCCGGCATCA TCCGGCGGGC CGATGCGGTG GACTTCACCG AAGAGGACTG GGACGCGGTG ATGGATGTGA ACCTCAAGGC CCTCTTCTTC ACCTGTCAGG CCTTCGGCCG CGCGGCGCTG GCGCGCGGCT CGGGCGGGCG GATCGTGAAC ATCGCCTCGC TCCTGAGCTT TCAGGGCGGC ATCCGCGTGC CCTCCTACAC GGCCGCCAAA CATGGCGTCG CGGGGATCAC CAAGCTGCTC GCCAACGAAT GGGCGGGCAG GGGCATCAAT GTGAACGCCA TCGCGCCGGG CTATATCGAG ACCAACAACA CCGAGGCGCT CCGCGCCGAC GAGGCGCGCA ACCGCGCGAT CCTCGAGCGG ATCCCGGCCG GGCGCTGGGG CAAGGCCGAC GACATCGCGG GCGCCGCGGT CTTCCTCGCC TCGCCCGCCG CGGCCTATGT CCATGGCGCG ATCCTCAAGG TCGATGGAGG CTGGCTTGCC CGCTGA
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Protein sequence | MISFSLEGQR ALVTGANTGI GQAIAVGLAG AGAEVIAAGR SSCAETVAMT GGRELRLDFA DPMAARDVFE AERIDILVNN AGIIRRADAV DFTEEDWDAV MDVNLKALFF TCQAFGRAAL ARGSGGRIVN IASLLSFQGG IRVPSYTAAK HGVAGITKLL ANEWAGRGIN VNAIAPGYIE TNNTEALRAD EARNRAILER IPAGRWGKAD DIAGAAVFLA SPAAAYVHGA ILKVDGGWLA R
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