Gene Rsph17029_2133 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_2133 
Symbol 
ID4897651 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009049 
Strand
Start bp2261623 
End bp2262348 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content71% 
IMG OID640112727 
Product2-deoxy-D-gluconate 3-dehydrogenase 
Protein accessionYP_001044008 
Protein GI126462894 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID[TIGR01832] 2-deoxy-D-gluconate 3-dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.617453 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCTCCT TCTCGCTCGA GGGCCAGCGC GCGCTGGTGA CCGGCGCCAA CACCGGGATC 
GGACAGGCGA TCGCGGTGGG TCTGGCCGGG GCGGGGGCCG AGGTGATCGC CGCCGGCCGC
TCCTCCTGCG CCGAGACGGT GGCCATGACC GGCGGGCGCG AGCTGCGGCT CGACTTCGCC
GACCCGATGG CCGCGCGCGA CGTGTTCGAG GCCGAGCGCA TCGACATTCT CGTGAACAAC
GCCGGCATCA TCCGGCGGGC CGATGCGGTG GACTTCACCG AAGAGGACTG GGACGCGGTG
ATGGATGTGA ACCTCAAGGC CCTCTTCTTC ACCTGTCAGG CCTTCGGCCG CGCGGCGCTG
GCGCGCGGCT CGGGCGGGCG GATCGTGAAC ATCGCCTCGC TCCTGAGCTT TCAGGGCGGC
ATCCGCGTGC CCTCCTACAC GGCCGCCAAA CATGGCGTCG CGGGGATCAC CAAGCTGCTC
GCCAACGAAT GGGCGGGCAG GGGCATCAAT GTGAACGCCA TCGCGCCGGG CTATATCGAG
ACCAACAACA CCGAGGCGCT CCGCGCCGAC GAGGCGCGCA ACCGCGCGAT CCTCGAGCGG
ATCCCGGCCG GGCGCTGGGG CAAGGCCGAC GACATCGCGG GCGCCGCGGT CTTCCTCGCC
TCGCCCGCCG CGGCCTATGT CCATGGCGCG ATCCTCAAGG TCGATGGAGG CTGGCTTGCC
CGCTGA
 
Protein sequence
MISFSLEGQR ALVTGANTGI GQAIAVGLAG AGAEVIAAGR SSCAETVAMT GGRELRLDFA 
DPMAARDVFE AERIDILVNN AGIIRRADAV DFTEEDWDAV MDVNLKALFF TCQAFGRAAL
ARGSGGRIVN IASLLSFQGG IRVPSYTAAK HGVAGITKLL ANEWAGRGIN VNAIAPGYIE
TNNTEALRAD EARNRAILER IPAGRWGKAD DIAGAAVFLA SPAAAYVHGA ILKVDGGWLA
R