| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_2061 |
|---|
| Symbol | |
|---|
| ID | 4895499 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17029 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009049 |
|---|
| Strand | - |
|---|
| Start bp | 2185609 |
|---|
| End bp | 2186604 |
|---|
| Gene Length | 996 bp |
|---|
| Protein Length | 331 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640112655 |
|---|
| Product | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding |
|---|
| Protein accession | YP_001043936 |
|---|
| Protein GI | 126462822 |
|---|
| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGACGTCG CCATCTTCAG CGCCAAGCCC TATGACCGCC AGTTTCTCGC CGCCGCCAAC
GAGGGCCGGC ACCAGCTGGC CTTCATCGAG GCGCGCCTGT CCGACGAGAC GGTGCGCTTC
GCCGGCGGGG CCGACTGCAT CTGCGCCTTC GTGAACGATC AGGTGACGGC GCCCGTCATC
GCCGAGCTGG CCGCGGCCGG CACGAAGCTG ATCGCGCTGC GCTCGGCGGG CTTCAACCAT
GTCGATCTGG CGGCAGCCGA GGCCGCCGGG ATGACGGTGG GGCGCGTGCC CGCCTATTCG
CCCCATGCGG TCGCCGAACA TGCGGTGGCC CTGATCCTCA CGCTCAACCG CAACACCCAC
CGCGCCTTCA ACCGGGTGCG CGAAGGCAAT TTCGCCCTTG AGGGGCTCCT CGGCTTCGAT
CTCTGCGGCA AGACCGTGGG CGTCGTCGGC ACCGGCCTCA TCGGGCGCAC CTTCGCGGGC
ATCATGCGCG GCTTCGGCTG CCGCGTGATC GCCTCGGATC CCTATCCGTC CGACGAATGC
GCGGCCCTCG GCGTGACCTA TGTGCCGCTC GAGCGGCTTT TCGCCGAGGC CGACATTCTC
AGTCTGCAAT GTCCGCTCAC GCCCGACACG CATCACCTGA TCGATGATCG GGCCATCGGC
CTCATGAAGC GCGGCGTGAT GATCGTGAAC ACCAGCCGCG GTGCGGTGGT GGATGCCAGC
GCCGTGATCC GCGGGCTCAA GAGCGGGGTG ATCGGCGGGC TCGCGCTCGA TGTCTACGAG
GAGGAGGCCG ACCTCTTCTT CGAGGACCTG TCGCAGAAGG CCATTCAGGA CGATGTCTTC
GCCCGGCTCC TGACCTTCCC GAACGTGCTC ATCACCGGCC ATCAGGCCTT CTTCACCCGC
GAGGCGCTGA GCGGCATCGC CCGCACCACG ATCGACAACA TCACCGCCTA CGAGGATACG
GGCCGCGTGC TCCATCCGGT GACTGCCCCC CGCTGA
|
|---|
| Protein sequence | MDVAIFSAKP YDRQFLAAAN EGRHQLAFIE ARLSDETVRF AGGADCICAF VNDQVTAPVI
AELAAAGTKL IALRSAGFNH VDLAAAEAAG MTVGRVPAYS PHAVAEHAVA LILTLNRNTH
RAFNRVREGN FALEGLLGFD LCGKTVGVVG TGLIGRTFAG IMRGFGCRVI ASDPYPSDEC
AALGVTYVPL ERLFAEADIL SLQCPLTPDT HHLIDDRAIG LMKRGVMIVN TSRGAVVDAS
AVIRGLKSGV IGGLALDVYE EEADLFFEDL SQKAIQDDVF ARLLTFPNVL ITGHQAFFTR
EALSGIARTT IDNITAYEDT GRVLHPVTAP R
|
|---|
| |