Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_1832 |
Symbol | |
ID | 4895300 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009049 |
Strand | + |
Start bp | 1930187 |
End bp | 1931392 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640112426 |
Product | putative ABC transporter solute-binding protein |
Protein accession | YP_001043711 |
Protein GI | 126462597 |
COG category | [R] General function prediction only |
COG ID | [COG4134] ABC-type uncharacterized transport system, periplasmic component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.563171 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTCGGAC GGATCATGGG GGCGGCACTG GCCTGCCTCG CGGCGCTGAC GCCCGCGGCA GAGGCCCAGA CGGACTGGGA CGCGGTACTG GCCGAGGCGA AGGGCCAGAC CGTCTACTGG CACGCCTGGG GCGGCGATCC GAAGATCAAC GCCTTCATCG CCTGGGTAGG CGAGCAGGCC CGCGCCCGCC ACGGTGTCAC GCTCGAGCAG GTGAAGCTCG CCGACACGAC CGAGGCGGTG GCGCGCGTGC TGGCCGAGAA GCAGGCCGGC CGCACCGAGG GCGGGGCGGT CGATCTCATC TGGATCAACG GCGAGAATTT CGCGGCGATG AAGGCGCAGG GCCTGCTGTC CGAGCCTTTC GCCGAGAGCC TGCCGAACTG GACCCATGTC GATGTGGCAG GCAAGCCCGC CGTCGTCACC GACTTCACCG AGCCCACGGG CGGGCTCGAA AGCCCCTGGG CCATGGCGCA GCTCGTGTTC GAGCATGATA GCGCGCGACT GCCCGCGCCG CCCCGGACGC TCGCCCAGCT CCTCGCCTGG ATCGAGGTCA ATCCGGGTCG CTTCACCTTC CCGCAGCCGC CGGACTATCT CGGAACCACC TTCCTCAAGC AGGTGCTCTA TGGCGTGATC GAGGATCCCG GGCTTCTCCA GAAGCCGGTC GATCCCGCCA CCTACGAGAC CGTCACCGCG CCGCTCTGGA CCTGGCTCGA TCGGGCCGAG CCCTATCTCT GGCGCGAGGG GCGCGCCTAT CCGGCCAATG AGCCCGCGCT CGGCCAGCTC TTTGCCGATG GCGAGATCGC CATCTCCTTC GCCTTCAACC CCGGCCGGGC CTCTGCCGCC ATCGCAGCGG GCGAACTGCC CGAGACGGTG CGCACCTTCA CGCTGGAGGG CGGCACCATC GGCAATGCGA GCTTCGTGGC GATCCCCTTC AACGCGGCCC ATGCCGCGGG GGCAAAGGTG ATCGCGAACC TGCTGCTCGA TCCCGAGGTG CAGGCGCGCG CGCAGGATCC GGCAGTGCTG GGTTTTCAGA CCGTGCTCGA TGTGGCGGCC CTGCCCGAGC CGGACCGCGC CCGCTTTGCA GCCCTCGATC TCGGCCCTGC CACGCTTGCG CCTGACGAAC TGGGCCCGGC CCTCCTCGAG CCGCACGCGA GCTGGATGGA GCGCATCGCC GAGGATTGGG TCCGCCGCTA CGGGACCGCG CAGTGA
|
Protein sequence | MFGRIMGAAL ACLAALTPAA EAQTDWDAVL AEAKGQTVYW HAWGGDPKIN AFIAWVGEQA RARHGVTLEQ VKLADTTEAV ARVLAEKQAG RTEGGAVDLI WINGENFAAM KAQGLLSEPF AESLPNWTHV DVAGKPAVVT DFTEPTGGLE SPWAMAQLVF EHDSARLPAP PRTLAQLLAW IEVNPGRFTF PQPPDYLGTT FLKQVLYGVI EDPGLLQKPV DPATYETVTA PLWTWLDRAE PYLWREGRAY PANEPALGQL FADGEIAISF AFNPGRASAA IAAGELPETV RTFTLEGGTI GNASFVAIPF NAAHAAGAKV IANLLLDPEV QARAQDPAVL GFQTVLDVAA LPEPDRARFA ALDLGPATLA PDELGPALLE PHASWMERIA EDWVRRYGTA Q
|
| |