| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_1809 |
|---|
| Symbol | |
|---|
| ID | 4896249 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17029 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009049 |
|---|
| Strand | + |
|---|
| Start bp | 1907085 |
|---|
| End bp | 1908026 |
|---|
| Gene Length | 942 bp |
|---|
| Protein Length | 313 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640112403 |
|---|
| Product | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding |
|---|
| Protein accession | YP_001043688 |
|---|
| Protein GI | 126462574 |
|---|
| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.218713 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAACGGC AACGGGTGAT CGCGGTGGGC TCCTACCCCG ACTGGGACAG GCAGGCGATG
GAGGCCAGCT TCACGGTCAC GACCGTTCCG CAGCTCGCCG ATCTGGCGGG CCTCGACCCT
GCGCTCCGCG CCGAGGCGGT GGCGGTGGCC TACAAGGGCG GCGCGCCCTT CGGCGGCGAG
ACGATGGATC TCCTGCCCGC GCTCGGCATC ATCGCGAACT TTGGCGTGGG CTTCGATGCC
ATCGACATCG AGGCCGCCCG CGCCCGCGGC ATCCGGGTGA CGAACACGCC CGATGTGCTG
AACGACGACG TGGCCGACAC GGCGCTGGCG ATGATGCTGG CCCTCTGCCG CCGCATCCCC
GAGGGCGACC GCTTCGTCCG CGAGGGCCGC TGGCCCAAGG GAGACTTTCC GCTGAACCGC
AAATTCTCGG GCGGGCGCGC GGGCATCATG GGGCTCGGCC GGATCGGGCG CGCCATCGCC
GACCGGCTCG TGGCCTTCGG CATGGAGATC CATTACCATT CGCGCAGCGC CAAGGACGTG
CCCGCAGGCT GGACCTTCCA CGCCACGCCC GAAGGGCTCG CCGCCGAGGT CGACTGGCTG
GTGGTGGCGC TGGTCGGCGG GCCTGCCACC GAAAGCTACG TCTCAGCCGA GGTCATTGCC
TGCATGCCGC AGGATGCGGT GCTGGTGAAC ATCTCGCGCG GTTCGACCGT GGACGAAGCG
GCGCTGCTGA CCGCCCTCGA AGCCGGGCGG ATCGGGGCCG CGCTCGACGT CTTCCGCAAC
GAGCCCGAGA TCGATCCGCG CTTCCACGCG CTCTCGAACG TGATCCTGCA GCCGCATCAG
GGGTCGGGCA CGGTCGAGAC CCGCCGCGCG ATGGGCGAGC TGCAGCGCGC CAACATCACG
GCCTTCCTTC AGGGCGAGCC GCTGCTGACT CCGGTCGCCT GA
|
|---|
| Protein sequence | MERQRVIAVG SYPDWDRQAM EASFTVTTVP QLADLAGLDP ALRAEAVAVA YKGGAPFGGE
TMDLLPALGI IANFGVGFDA IDIEAARARG IRVTNTPDVL NDDVADTALA MMLALCRRIP
EGDRFVREGR WPKGDFPLNR KFSGGRAGIM GLGRIGRAIA DRLVAFGMEI HYHSRSAKDV
PAGWTFHATP EGLAAEVDWL VVALVGGPAT ESYVSAEVIA CMPQDAVLVN ISRGSTVDEA
ALLTALEAGR IGAALDVFRN EPEIDPRFHA LSNVILQPHQ GSGTVETRRA MGELQRANIT
AFLQGEPLLT PVA
|
|---|
| |