Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_1806 |
Symbol | |
ID | 4897265 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009049 |
Strand | - |
Start bp | 1903874 |
End bp | 1905160 |
Gene Length | 1287 bp |
Protein Length | 428 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 640112400 |
Product | helix-turn-helix domain-containing protein |
Protein accession | YP_001043685 |
Protein GI | 126462571 |
COG category | [R] General function prediction only |
COG ID | [COG3800] Predicted transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.496023 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGATGA CGGCGCTGAC GGGCAGCCGG GTGCGCGAAC GGCGCTTGCA GCTCGGGCTG AGGCAGGCCG ATCTGGCGCG GGCGGCGGGG ATCTCGGCCT CCTATCTCAA CCTGATCGAG CACAACCGTC GCCGGATCGG CGACGAGGTT CTGGCGCGGC TCGCCCGGGC CCTGAAGGTC GAGGCGCAGA CGCTCTCGGC CGGGGCCGAG GGCGTGCTGG TCGAGGATCT GCGCGCCGCC GCCGCCTCGG CGGGCGACGA TCAGCCCGAG CTCGACCGGG TCGAGGATTT CGTGGGCCGC TTTCCGGGCT GGGCGCGGAT GCTGGCTGCG CAGCACCGCC GGATGGGGCT GCTCGAGCGG ACTGTCAACG CGCTCAACGA CCGGCTGACC CATGACACCC ACCTGAGCCA GGCGCTGCAC GAGGTTCTCT CGGCGGTGAG CGCCGTGCGC TCCACCGCGG CGATCCTCGC CGAGACCGAG GATATCGAGC CCGACTGGCG CGCGCGTTTC CATGCCAACA TCCATGCCGA CAGCGAGCGG CTGGCCGTGG GCGCCGAGGC GCTGGTGGCC TATCTCGATG CCGCCTCGGA AGACGAGGAG CAGGGGGTCG TGGCCCCGCA GGAGGAGGTG GAGGGCTGGC TTGCCGCGCG CGACTGGCAT CTGGCCGAGC TGGAGGAGCC GGGCGGGCGG GCGCGGCTCG AGGCCGAGAT CGAGGGGTTG GCCTCGGCCG CCGGACGCGC GATGGCGCGC GACTGGGTGC TGCGGGCCGA GGCGGATGCG CGGGCCATGC CGCTCGATCC GTTCCGCGCC GCGCTCCGCG CCGAGGGCGA TCCGGTGCTG GTCGCGCGCC GCTTCGGCGT GGGGGTGCTC GCGGCCTTCC GGCGGATCGC CACGCTGCCC GGCGCCATTG CGGGCCTCGT GATCTGCGAC GGCTCGGGCA CCCTCGTCTT CCGCAAGCCG CCCGAGGGGT TCCTGCTGCC GCGCTTCGGG GCGGCCTGTC CCCTCTGGCC GCTCTTCGAG GCGCTGGCCC ACCCGATGCG CCCCGTCGAG GCGGTGGTCG AGCCCGCCGC CCGCACCCGT CGCCGCTTCC GCGCCCGCGC CTTCTGCGAG CCGCACCATC CGCAGGGCTT CACCGGGCCG GAACTGCGCG AGGCGGGGAT GCTGATCGAG CCCGCCGTGC CCGATCCGGC GCTCGTGCCG CGCGCGGTCG GCACCTCCTG CCGGATCTGC CCGCGGGCAG GCTGCCCCGC CCGGCGCGAG CCTTCGATCC TGCTCGAGGG CTCGTGA
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Protein sequence | MPMTALTGSR VRERRLQLGL RQADLARAAG ISASYLNLIE HNRRRIGDEV LARLARALKV EAQTLSAGAE GVLVEDLRAA AASAGDDQPE LDRVEDFVGR FPGWARMLAA QHRRMGLLER TVNALNDRLT HDTHLSQALH EVLSAVSAVR STAAILAETE DIEPDWRARF HANIHADSER LAVGAEALVA YLDAASEDEE QGVVAPQEEV EGWLAARDWH LAELEEPGGR ARLEAEIEGL ASAAGRAMAR DWVLRAEADA RAMPLDPFRA ALRAEGDPVL VARRFGVGVL AAFRRIATLP GAIAGLVICD GSGTLVFRKP PEGFLLPRFG AACPLWPLFE ALAHPMRPVE AVVEPAARTR RRFRARAFCE PHHPQGFTGP ELREAGMLIE PAVPDPALVP RAVGTSCRIC PRAGCPARRE PSILLEGS
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