Gene Rsph17029_1806 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_1806 
Symbol 
ID4897265 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009049 
Strand
Start bp1903874 
End bp1905160 
Gene Length1287 bp 
Protein Length428 aa 
Translation table11 
GC content75% 
IMG OID640112400 
Producthelix-turn-helix domain-containing protein 
Protein accessionYP_001043685 
Protein GI126462571 
COG category[R] General function prediction only 
COG ID[COG3800] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.496023 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGATGA CGGCGCTGAC GGGCAGCCGG GTGCGCGAAC GGCGCTTGCA GCTCGGGCTG 
AGGCAGGCCG ATCTGGCGCG GGCGGCGGGG ATCTCGGCCT CCTATCTCAA CCTGATCGAG
CACAACCGTC GCCGGATCGG CGACGAGGTT CTGGCGCGGC TCGCCCGGGC CCTGAAGGTC
GAGGCGCAGA CGCTCTCGGC CGGGGCCGAG GGCGTGCTGG TCGAGGATCT GCGCGCCGCC
GCCGCCTCGG CGGGCGACGA TCAGCCCGAG CTCGACCGGG TCGAGGATTT CGTGGGCCGC
TTTCCGGGCT GGGCGCGGAT GCTGGCTGCG CAGCACCGCC GGATGGGGCT GCTCGAGCGG
ACTGTCAACG CGCTCAACGA CCGGCTGACC CATGACACCC ACCTGAGCCA GGCGCTGCAC
GAGGTTCTCT CGGCGGTGAG CGCCGTGCGC TCCACCGCGG CGATCCTCGC CGAGACCGAG
GATATCGAGC CCGACTGGCG CGCGCGTTTC CATGCCAACA TCCATGCCGA CAGCGAGCGG
CTGGCCGTGG GCGCCGAGGC GCTGGTGGCC TATCTCGATG CCGCCTCGGA AGACGAGGAG
CAGGGGGTCG TGGCCCCGCA GGAGGAGGTG GAGGGCTGGC TTGCCGCGCG CGACTGGCAT
CTGGCCGAGC TGGAGGAGCC GGGCGGGCGG GCGCGGCTCG AGGCCGAGAT CGAGGGGTTG
GCCTCGGCCG CCGGACGCGC GATGGCGCGC GACTGGGTGC TGCGGGCCGA GGCGGATGCG
CGGGCCATGC CGCTCGATCC GTTCCGCGCC GCGCTCCGCG CCGAGGGCGA TCCGGTGCTG
GTCGCGCGCC GCTTCGGCGT GGGGGTGCTC GCGGCCTTCC GGCGGATCGC CACGCTGCCC
GGCGCCATTG CGGGCCTCGT GATCTGCGAC GGCTCGGGCA CCCTCGTCTT CCGCAAGCCG
CCCGAGGGGT TCCTGCTGCC GCGCTTCGGG GCGGCCTGTC CCCTCTGGCC GCTCTTCGAG
GCGCTGGCCC ACCCGATGCG CCCCGTCGAG GCGGTGGTCG AGCCCGCCGC CCGCACCCGT
CGCCGCTTCC GCGCCCGCGC CTTCTGCGAG CCGCACCATC CGCAGGGCTT CACCGGGCCG
GAACTGCGCG AGGCGGGGAT GCTGATCGAG CCCGCCGTGC CCGATCCGGC GCTCGTGCCG
CGCGCGGTCG GCACCTCCTG CCGGATCTGC CCGCGGGCAG GCTGCCCCGC CCGGCGCGAG
CCTTCGATCC TGCTCGAGGG CTCGTGA
 
Protein sequence
MPMTALTGSR VRERRLQLGL RQADLARAAG ISASYLNLIE HNRRRIGDEV LARLARALKV 
EAQTLSAGAE GVLVEDLRAA AASAGDDQPE LDRVEDFVGR FPGWARMLAA QHRRMGLLER
TVNALNDRLT HDTHLSQALH EVLSAVSAVR STAAILAETE DIEPDWRARF HANIHADSER
LAVGAEALVA YLDAASEDEE QGVVAPQEEV EGWLAARDWH LAELEEPGGR ARLEAEIEGL
ASAAGRAMAR DWVLRAEADA RAMPLDPFRA ALRAEGDPVL VARRFGVGVL AAFRRIATLP
GAIAGLVICD GSGTLVFRKP PEGFLLPRFG AACPLWPLFE ALAHPMRPVE AVVEPAARTR
RRFRARAFCE PHHPQGFTGP ELREAGMLIE PAVPDPALVP RAVGTSCRIC PRAGCPARRE
PSILLEGS