Gene Rsph17029_1725 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_1725 
Symbol 
ID4897957 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009049 
Strand
Start bp1819498 
End bp1820184 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content70% 
IMG OID640112318 
ProductHAD family hydrolase 
Protein accessionYP_001043607 
Protein GI126462493 
COG category[R] General function prediction only 
COG ID[COG0637] Predicted phosphatase/phosphohexomutase 
TIGRFAM ID[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATATCG GGCTTGTCAT TTTCGATTGC GACGGGGTTC TGGTCGATTC GGAAGTTCTG 
GCCGTGGCCG TCCTCATCGC AGAGCTGGAC CGGGCGGGCG CGCGGGTCGA CGAGGCCTTC
GTGCATCGGC ATTTTCTGGG CCGCAGCTTT CCGGCCGTTC AGGAGGTCGT TCAGCGCCAG
TTCGGCGTGA CCCTGCCCGA AACTTTTCAG GCCGAAGAAC GCGCCCGGCT GCTGGCGGCC
TTCGAGACCG GCCTGCGGGC CATGCCCGGC GCGGCGGAGA CCGTCTGCGC GCTGGCCGTG
CCCTTCTGCC TCGCCACGTC GAGCACGCCG GCCCGGCTCA CGCGCTCGCT CGAGATCACG
GGCCTTGCCG CGTTTTTCGA GGGGCGCTGC TTCACCGCGA GTCAGGTGGC GCGGGGCAAG
CCCGCGCCCG ATCTGTTCCT GCTCGCCGCG GCCGAGATGG GCGTCGCGCC CGCACGCTGC
CTCGTGATCG AGGATACCGA GCCCGGCGTG CGCGCGGGCC TCGCGGCCGG GATGCAGGTC
TGGCGCTTCA CCGGCGGCAG CCATTTCGCG AACCGATCCC CCGAGGATGC GCCCGATGCC
CGGCCGCACC GGCGGTTCGA CAGCTTCGAC CGCTTCTACG AGACCCTGCC CGGCCTGCGC
CGGGCCAACT GCGAGACCCT GACATGA
 
Protein sequence
MDIGLVIFDC DGVLVDSEVL AVAVLIAELD RAGARVDEAF VHRHFLGRSF PAVQEVVQRQ 
FGVTLPETFQ AEERARLLAA FETGLRAMPG AAETVCALAV PFCLATSSTP ARLTRSLEIT
GLAAFFEGRC FTASQVARGK PAPDLFLLAA AEMGVAPARC LVIEDTEPGV RAGLAAGMQV
WRFTGGSHFA NRSPEDAPDA RPHRRFDSFD RFYETLPGLR RANCETLT