| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_1659 |
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| Symbol | |
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| ID | 4895787 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009049 |
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| Strand | - |
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| Start bp | 1752417 |
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| End bp | 1754918 |
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| Gene Length | 2502 bp |
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| Protein Length | 833 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640112252 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) |
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| Protein accession | YP_001043541 |
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| Protein GI | 126462427 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0467119 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0611646 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGAGA TGCAAAGCCT GCGCCATCGT CTGATCAGGC AACCCGGTCC GGTGTCCGGC
GAGTGCTGGA TCGCCTTCTT CGATGGCGTG GCCCATCCGG TTCTCATCAA GAACGCGCAA
GGTCAGGTCA TCTTCGCCAA TCGCGCGGCC TGCGACCTGC TCGGTCGGGA TCGCAGCGGT
CTCGCCGGCG GTGCCGAGCA TGAGCTGGTG GCGGGCACGC AGGCCGAGCA GATCGCCTCC
TTCGATGCCG AGGCCATGCG CCGGGGCTCG ATCTCGGCCG AGCAGGAGAT GCCGGGTCCG
CGTGGCGTCC GCCGCTTCCT CGTCTCCCGC CGCCCGGCGG GCGAGCATCT GGTGGTGACC
TTCTTCGAGA TCACCGATTT GCGCGAGACC GAGGGCGTTC TGCGCCAGCG CGAGGCACAT
CTGCGCAATC TGCTCGAGCT GCATCCGGTG GCGCCCTTCA GCTTCACCGC CGACGGGGTG
CTCTCGGATC TCTCAGACCG GCTGGTCGCG ATCACCGGGC TGCCTGCGGG CACGCGGCAT
GTCGATGCCT GGTGGGCCGC GATGCATCCC GGCGACCGGC GCGACCTGCG ACGGGCCTGG
ATCCGCTCGG TCCGGGGGGG GCAGTCCTTC GATGCCGAGC ACCGGCTGCA GATGCCGGAC
GGTGCCTACC GCTGGTTCCG GGCGCGCGTC GTGGCCCGGC CGAGGGATCA GGATCAGCGG
GTGGACCGCT GGTTCGGCAT CATCGAGGAT GTGCACGAGA GGCGCACCAC CGTCGAGCAG
CTGCGCGAGA GCGAAGCGCG CTTCCGCGCC TTCGCCGACG ATGCGCCGGT GATGATCTGG
ATGACGGACA CCGAGGGGCG GAACGTCTTC GTCAGCCGCA GCTGGCTTGG CGCCACCGGC
CAGTCGCTGG ACGAGGCCAT GGGGACGGGC TGGATCGATG TCGTTCATCC CGACGACCGC
GACGCCACGG CTTCGATCAC GCGGGATGCG ATGCGCCGGC GCATCGCCTA CACGAACGAG
TTCCGCATCC GCCGGAAGGA TGGCGGGTGG TGCTGGGTCA TCGACGTGGG ACACCCCCGC
CTCCTCGCCG ACGGCACCTT CATCGGCTAC ATCGGCTGCT GCGTCGACAT CAGCGCCCGC
CGTCAGGCCG AGGAGGACCG GGTGATGGCG CAGCTCCAGG TCTTTCACAT GGCGCGCCAC
GACATGCTGA CGGGCCTGCC CAACCGGCAT TATTTCGGCG ACTGCTATCA GGAGGCGGTG
GCGAGCCTCA CGCCGGAGCG GTCGGTTGCC GTGCTGATGC TCGATCTCGA CGGGTTCAAG
ACGGTGAACG ACACCCGCGG CCACCCGGTG GGCGATCAGG TGCTGTGCGA AGTCGCCAAC
CGGCTGCGCA CCTCGGTGCG CAGCACCGAC ACGGTGGCGC GGCTGGGCGG GGACGAGTTT
GCCGTGATCC AGACGCCGAT CCGCTCCGAG CAGGAGGCCT GCGATCTGGC CCGCCGCCTG
ATCGCGGCCA TCTCGAAGCC CTTCGATCTC GAGGGGGCGG TGCCCGAAGT GGGCGCCAGC
GTGGGCATCG CCTTCGCCCG CGGGCGCGGC GACAGCGCCG AGGAGATCAT GCGCTACGCC
GATGTGGCGC TTTATGCCGC CAAGCAGGCG GGACGCGGCA CCTTCCGTGT CTTCGACGAG
GCGACCGACA CCCATCTTCA GAGCCGGCAG AAGATGAAGG CGGCGCTCCG GGCTGCGCTG
GGTCTGGGCG AACTCTCGGT CTTCTACCAG CCGCTGATCG GGTTGCGCGA CGGGCAGGTC
ACGGCCTGCG AGGCGCTGAT GCGCTGGCAT CGCAAGGGGG CGGGCTGGAT CACGCCCGAC
CAGTTCATCC CGCTTGCGGA AGAGGCGGGG CTCATCGGCG ACATGGGCGA CTGGGTGCTG
CACGAGGCCT GCGCTCAGGC CGCTCGATGG CCGGACAGCG TGTCGGTGGC GGTCAACCTG
TCGCCGCTCC AGTTCCATGG CGGGGCGCTG GTCGATCAGG TGGCCTCGGC GCTGCGCGCC
TCGGGCCTGC CGCCCGAACG GCTTCAGCTC GAGATCACCG AATCCGTGCT GCTCGACCCC
ACCGACCGGA ACATCGGCGT GCTGCAGGAT CTGCGGGCGC TGGGGGCGAA GATCGTGATG
GACGATTTCG GCACCGGCTA CTCGTCGCTG GGCTATCTGC GCAGCTTCCC CTTCGACAAG
ATCAAGGTGG ATCGCTCCTT CATCCGCGAC CTTCCCGACG CGCGCGAGGC GCTGGCCATC
CTGAAGGCGG TGGCCGGGCT CGGACGCAGC CTCGACATGC GCACCACCGT CGAGGGGGTC
GAGACGCAGG CGCAGCTCGA TTGCGCCATC GCCGAGGGGG TGGACGAGGC GCAGGGCTAT
TTCTTCTCGC GCCCGCTGCC TGCCCCCGGG ATCGCAAGCT TCATCTCCGG CTGCCTGCCC
AAGCGCAGGA TACAGCCGGC GACGGGGGAC GCCGCGACCT GA
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| Protein sequence | MTEMQSLRHR LIRQPGPVSG ECWIAFFDGV AHPVLIKNAQ GQVIFANRAA CDLLGRDRSG
LAGGAEHELV AGTQAEQIAS FDAEAMRRGS ISAEQEMPGP RGVRRFLVSR RPAGEHLVVT
FFEITDLRET EGVLRQREAH LRNLLELHPV APFSFTADGV LSDLSDRLVA ITGLPAGTRH
VDAWWAAMHP GDRRDLRRAW IRSVRGGQSF DAEHRLQMPD GAYRWFRARV VARPRDQDQR
VDRWFGIIED VHERRTTVEQ LRESEARFRA FADDAPVMIW MTDTEGRNVF VSRSWLGATG
QSLDEAMGTG WIDVVHPDDR DATASITRDA MRRRIAYTNE FRIRRKDGGW CWVIDVGHPR
LLADGTFIGY IGCCVDISAR RQAEEDRVMA QLQVFHMARH DMLTGLPNRH YFGDCYQEAV
ASLTPERSVA VLMLDLDGFK TVNDTRGHPV GDQVLCEVAN RLRTSVRSTD TVARLGGDEF
AVIQTPIRSE QEACDLARRL IAAISKPFDL EGAVPEVGAS VGIAFARGRG DSAEEIMRYA
DVALYAAKQA GRGTFRVFDE ATDTHLQSRQ KMKAALRAAL GLGELSVFYQ PLIGLRDGQV
TACEALMRWH RKGAGWITPD QFIPLAEEAG LIGDMGDWVL HEACAQAARW PDSVSVAVNL
SPLQFHGGAL VDQVASALRA SGLPPERLQL EITESVLLDP TDRNIGVLQD LRALGAKIVM
DDFGTGYSSL GYLRSFPFDK IKVDRSFIRD LPDAREALAI LKAVAGLGRS LDMRTTVEGV
ETQAQLDCAI AEGVDEAQGY FFSRPLPAPG IASFISGCLP KRRIQPATGD AAT
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