Gene Rsph17029_1624 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_1624 
Symbol 
ID4895075 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009049 
Strand
Start bp1712333 
End bp1714882 
Gene Length2550 bp 
Protein Length849 aa 
Translation table11 
GC content67% 
IMG OID640112215 
Product1A family penicillin-binding protein 
Protein accessionYP_001043506 
Protein GI126462392 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG5009] Membrane carboxypeptidase/penicillin-binding protein 
TIGRFAM ID[TIGR02074] penicillin-binding protein, 1A family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.521017 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.641281 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTTGAGGT TCGTAGGCTC GGTCTTCGGG GCCATCTTCA CCGCGATCAC GCTGGGGCTG 
CTTGCGCTCG CCCTCACGAT CGGGGCGGTG TTCTGGATGT ATTCGCGCGA CCTGCCGAGC
CATGAGAGCC TTGCCCAATA TACGCCGCCG ACGATCAGCC GGATCTATTC GGGCGAGGGG
CGGATCATCG ACGAATTCGC ACAGGAGCGG CGGATCTTCG CGCCGATCGA GGAGATCCCC
GACCTGGTGA AGAACGCCTT CATCTCGGCC GAGGACAAGA ACTTCTACAC CCACCACGGC
TACGATGCCC GCGGCATCGC CGTGGCGGCC TTCGAGGCGG TGCGCTCGCG CGGCAAGACG
GTGCGCGGCG CCTCGACCAT CACCCAGCAG GTGATGAAGA ACTTCCTCCT GTCGGGCGAC
CGGACGGGCG AGCGGAAGAT CAAGGAGATC ATCCTCGCCA CCCGGATCGA GGAGACGCTG
CCCAAGGACA AGATCCTCGA ACTCTATCTG AACGAGATCT TCCTCGGGCA GAACAGCTAC
GGCGTGGCGG CGGCGGCGCA GACCTATTTC AACAAGACGC TGTCGCAGCT GACCCCGGCC
GAGGCCGCAA CGCTCGCCTC GATGCCGCAG GCTCCGAGCC AGTATCACCC GGTGCGGGCG
AAGGAGCGGC TGACCCAGCG GCGCAACTAT GTGCTGCGCG AGATGTTCGA GAACGGCTAT
ATCGACGAGG CCACGCTGAC CTCGTCGCTG AACGAGCCGC TGCGCTCGGT GCAGAACGGC
GATTATCCGG CCTTCCGCGA GGCGCTGCCG CCGCGCGACT ATTTCACCGA CGAGATCCGC
CGCCAGCTCT CCTCCGAGTT CGGCGAGCAG GAATTCTTCG GCGGCGGCCT CACGATCCGC
GCCACCATCG ACCGGGAGCT GCAGGAGGAG GCGGCGGCCG CCCTGCGCGT GGGGCTCGAG
AAATACGACC GCAACCTCGG CATCTGGCGG GGAACGCGGC AGACGCTGCC CAAAGACAAG
CTCGACTCGG AGGCGGACTG GCGGGCGGCG CTGGCGGCGG CCCGGGTGCC GCGCGACGTG
CCGGGCTGGC ATCCGGCGGT GGTGCTCGAG GTGGGCGACA CTGCGGCCCG CATCGGGATC
GAGGGCGTCG AGGAGGACGA GGACGGCCAT TACATCCCGG CCGAGGATGT GACCTGGGCG
CGCAAGCGGC AGGCCGACGG CAAGCTCGGG CCCAAGGCGC GCAGGGCGGG CGATCTTCTC
GCGGTGGGCG ACGTGGTGCT GGTGCGCGAG GTGACGGGCG AGGACGGCAG CTTCCGCCGC
TGGTCGCTGC GCCAGGTGCC CGAGGTGCAG GGCGCCTTCA TGGCAATGGA CGTGAATTCG
GGCCGCGTGC TCGCCATGCA GGGCGGCTTC TCCTACCAGT ATTCGGTCTT CAACCGCGCC
ACCCAGGCCA CGCGCCAGCC GGGGTCGAGC TTCAAGCCCT TCGTCTATGC GGCGGCCCTC
GATTCCGGCT TCACGCCGGC CACCATCGTG ATCGACGCGC CCATCGAGGT GCAGACGGCG
CAGGGGCTCT GGACGCCGAA GAACGCGTCC GGGAAATATT ACGGGCCTAC GCCGCTGCGC
ACCGGGGTCG AGCAGTCGCG GAACCTGATG ACGGTGCGGA TCGCGCAGGA GATCGGCATG
GACACCGTGG CCTCCTATGC CGAGCGCTTC GGCGTCTACG ACCGGATGGG GCAGTTCCTC
GCCAATGCGC TCGGCGCCGA GGAGACGACG CTCTTCAAGA TGGTGGCGGC CTACGCCATG
TTCGCCAACG GCGGCGAGCG GGTGCAGCCC ACTCTGGTCG ACCGGGTGCA GGACCGCTTC
GGTCGCACGA TCTATCGGCA CGATCAGCGG ATCTGCGACG ACTGCGCCCA GCCGCTGCTG
CCCGAGGGAC GGGCGCCGCA CATCACCTCG AAGCGCGAGC GGGTGATGGA TGCGATCACC
GCCTATCAGC TCACCTCGAT GATGGAGGGC GTGATCAAGC GCGGCACGGG GCGGGGGATC
AACCTGCCGG TGCCGGTGGC GGGCAAGACC GGCACCACGA ACGATGCCAA GGACGTCTGG
TTCATCGGCT ATACCTCGAA CATCGTCGCA GGCTGCTACA TCGGTTACGA CCAGCCGCGC
TCGATGGGCT CGGCCTCGGG CGGCGGCTTC TGCGGTCCGG TGTTCCAGAG CTTCATGACG
AAGGCCGTGA AGAAATACGG CGGCTCCGAG TTCCGCGTGC CCCCGGGCGG CTATTTCATG
AAGATCGACC GGTTCACCGG CGCGCGCCTG CCCGACGATG CGACGGGCGA CAATGTGGTG
GCCGAGTATT TCCGTCAGGG CGAGGATCCG GTCTTCGGCA TGGGCGCCTG GGTCGACGGC
GGCTTTGCCA TGGGATCGAA CCTGCCGCTG TTTGCTTATG GCGAGGAGGA GACCGAGCAG
GGCGCGACCG TCACCACTGC CACGGGCGAG CGGAAGGTCA TTCCCAAGAA GGCCGATTTC
GGCACGCTCA GTTCGGGCGG TCTCTACTGA
 
Protein sequence
MLRFVGSVFG AIFTAITLGL LALALTIGAV FWMYSRDLPS HESLAQYTPP TISRIYSGEG 
RIIDEFAQER RIFAPIEEIP DLVKNAFISA EDKNFYTHHG YDARGIAVAA FEAVRSRGKT
VRGASTITQQ VMKNFLLSGD RTGERKIKEI ILATRIEETL PKDKILELYL NEIFLGQNSY
GVAAAAQTYF NKTLSQLTPA EAATLASMPQ APSQYHPVRA KERLTQRRNY VLREMFENGY
IDEATLTSSL NEPLRSVQNG DYPAFREALP PRDYFTDEIR RQLSSEFGEQ EFFGGGLTIR
ATIDRELQEE AAAALRVGLE KYDRNLGIWR GTRQTLPKDK LDSEADWRAA LAAARVPRDV
PGWHPAVVLE VGDTAARIGI EGVEEDEDGH YIPAEDVTWA RKRQADGKLG PKARRAGDLL
AVGDVVLVRE VTGEDGSFRR WSLRQVPEVQ GAFMAMDVNS GRVLAMQGGF SYQYSVFNRA
TQATRQPGSS FKPFVYAAAL DSGFTPATIV IDAPIEVQTA QGLWTPKNAS GKYYGPTPLR
TGVEQSRNLM TVRIAQEIGM DTVASYAERF GVYDRMGQFL ANALGAEETT LFKMVAAYAM
FANGGERVQP TLVDRVQDRF GRTIYRHDQR ICDDCAQPLL PEGRAPHITS KRERVMDAIT
AYQLTSMMEG VIKRGTGRGI NLPVPVAGKT GTTNDAKDVW FIGYTSNIVA GCYIGYDQPR
SMGSASGGGF CGPVFQSFMT KAVKKYGGSE FRVPPGGYFM KIDRFTGARL PDDATGDNVV
AEYFRQGEDP VFGMGAWVDG GFAMGSNLPL FAYGEEETEQ GATVTTATGE RKVIPKKADF
GTLSSGGLY