Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_1624 |
Symbol | |
ID | 4895075 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009049 |
Strand | - |
Start bp | 1712333 |
End bp | 1714882 |
Gene Length | 2550 bp |
Protein Length | 849 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640112215 |
Product | 1A family penicillin-binding protein |
Protein accession | YP_001043506 |
Protein GI | 126462392 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG5009] Membrane carboxypeptidase/penicillin-binding protein |
TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.521017 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.641281 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTTGAGGT TCGTAGGCTC GGTCTTCGGG GCCATCTTCA CCGCGATCAC GCTGGGGCTG CTTGCGCTCG CCCTCACGAT CGGGGCGGTG TTCTGGATGT ATTCGCGCGA CCTGCCGAGC CATGAGAGCC TTGCCCAATA TACGCCGCCG ACGATCAGCC GGATCTATTC GGGCGAGGGG CGGATCATCG ACGAATTCGC ACAGGAGCGG CGGATCTTCG CGCCGATCGA GGAGATCCCC GACCTGGTGA AGAACGCCTT CATCTCGGCC GAGGACAAGA ACTTCTACAC CCACCACGGC TACGATGCCC GCGGCATCGC CGTGGCGGCC TTCGAGGCGG TGCGCTCGCG CGGCAAGACG GTGCGCGGCG CCTCGACCAT CACCCAGCAG GTGATGAAGA ACTTCCTCCT GTCGGGCGAC CGGACGGGCG AGCGGAAGAT CAAGGAGATC ATCCTCGCCA CCCGGATCGA GGAGACGCTG CCCAAGGACA AGATCCTCGA ACTCTATCTG AACGAGATCT TCCTCGGGCA GAACAGCTAC GGCGTGGCGG CGGCGGCGCA GACCTATTTC AACAAGACGC TGTCGCAGCT GACCCCGGCC GAGGCCGCAA CGCTCGCCTC GATGCCGCAG GCTCCGAGCC AGTATCACCC GGTGCGGGCG AAGGAGCGGC TGACCCAGCG GCGCAACTAT GTGCTGCGCG AGATGTTCGA GAACGGCTAT ATCGACGAGG CCACGCTGAC CTCGTCGCTG AACGAGCCGC TGCGCTCGGT GCAGAACGGC GATTATCCGG CCTTCCGCGA GGCGCTGCCG CCGCGCGACT ATTTCACCGA CGAGATCCGC CGCCAGCTCT CCTCCGAGTT CGGCGAGCAG GAATTCTTCG GCGGCGGCCT CACGATCCGC GCCACCATCG ACCGGGAGCT GCAGGAGGAG GCGGCGGCCG CCCTGCGCGT GGGGCTCGAG AAATACGACC GCAACCTCGG CATCTGGCGG GGAACGCGGC AGACGCTGCC CAAAGACAAG CTCGACTCGG AGGCGGACTG GCGGGCGGCG CTGGCGGCGG CCCGGGTGCC GCGCGACGTG CCGGGCTGGC ATCCGGCGGT GGTGCTCGAG GTGGGCGACA CTGCGGCCCG CATCGGGATC GAGGGCGTCG AGGAGGACGA GGACGGCCAT TACATCCCGG CCGAGGATGT GACCTGGGCG CGCAAGCGGC AGGCCGACGG CAAGCTCGGG CCCAAGGCGC GCAGGGCGGG CGATCTTCTC GCGGTGGGCG ACGTGGTGCT GGTGCGCGAG GTGACGGGCG AGGACGGCAG CTTCCGCCGC TGGTCGCTGC GCCAGGTGCC CGAGGTGCAG GGCGCCTTCA TGGCAATGGA CGTGAATTCG GGCCGCGTGC TCGCCATGCA GGGCGGCTTC TCCTACCAGT ATTCGGTCTT CAACCGCGCC ACCCAGGCCA CGCGCCAGCC GGGGTCGAGC TTCAAGCCCT TCGTCTATGC GGCGGCCCTC GATTCCGGCT TCACGCCGGC CACCATCGTG ATCGACGCGC CCATCGAGGT GCAGACGGCG CAGGGGCTCT GGACGCCGAA GAACGCGTCC GGGAAATATT ACGGGCCTAC GCCGCTGCGC ACCGGGGTCG AGCAGTCGCG GAACCTGATG ACGGTGCGGA TCGCGCAGGA GATCGGCATG GACACCGTGG CCTCCTATGC CGAGCGCTTC GGCGTCTACG ACCGGATGGG GCAGTTCCTC GCCAATGCGC TCGGCGCCGA GGAGACGACG CTCTTCAAGA TGGTGGCGGC CTACGCCATG TTCGCCAACG GCGGCGAGCG GGTGCAGCCC ACTCTGGTCG ACCGGGTGCA GGACCGCTTC GGTCGCACGA TCTATCGGCA CGATCAGCGG ATCTGCGACG ACTGCGCCCA GCCGCTGCTG CCCGAGGGAC GGGCGCCGCA CATCACCTCG AAGCGCGAGC GGGTGATGGA TGCGATCACC GCCTATCAGC TCACCTCGAT GATGGAGGGC GTGATCAAGC GCGGCACGGG GCGGGGGATC AACCTGCCGG TGCCGGTGGC GGGCAAGACC GGCACCACGA ACGATGCCAA GGACGTCTGG TTCATCGGCT ATACCTCGAA CATCGTCGCA GGCTGCTACA TCGGTTACGA CCAGCCGCGC TCGATGGGCT CGGCCTCGGG CGGCGGCTTC TGCGGTCCGG TGTTCCAGAG CTTCATGACG AAGGCCGTGA AGAAATACGG CGGCTCCGAG TTCCGCGTGC CCCCGGGCGG CTATTTCATG AAGATCGACC GGTTCACCGG CGCGCGCCTG CCCGACGATG CGACGGGCGA CAATGTGGTG GCCGAGTATT TCCGTCAGGG CGAGGATCCG GTCTTCGGCA TGGGCGCCTG GGTCGACGGC GGCTTTGCCA TGGGATCGAA CCTGCCGCTG TTTGCTTATG GCGAGGAGGA GACCGAGCAG GGCGCGACCG TCACCACTGC CACGGGCGAG CGGAAGGTCA TTCCCAAGAA GGCCGATTTC GGCACGCTCA GTTCGGGCGG TCTCTACTGA
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Protein sequence | MLRFVGSVFG AIFTAITLGL LALALTIGAV FWMYSRDLPS HESLAQYTPP TISRIYSGEG RIIDEFAQER RIFAPIEEIP DLVKNAFISA EDKNFYTHHG YDARGIAVAA FEAVRSRGKT VRGASTITQQ VMKNFLLSGD RTGERKIKEI ILATRIEETL PKDKILELYL NEIFLGQNSY GVAAAAQTYF NKTLSQLTPA EAATLASMPQ APSQYHPVRA KERLTQRRNY VLREMFENGY IDEATLTSSL NEPLRSVQNG DYPAFREALP PRDYFTDEIR RQLSSEFGEQ EFFGGGLTIR ATIDRELQEE AAAALRVGLE KYDRNLGIWR GTRQTLPKDK LDSEADWRAA LAAARVPRDV PGWHPAVVLE VGDTAARIGI EGVEEDEDGH YIPAEDVTWA RKRQADGKLG PKARRAGDLL AVGDVVLVRE VTGEDGSFRR WSLRQVPEVQ GAFMAMDVNS GRVLAMQGGF SYQYSVFNRA TQATRQPGSS FKPFVYAAAL DSGFTPATIV IDAPIEVQTA QGLWTPKNAS GKYYGPTPLR TGVEQSRNLM TVRIAQEIGM DTVASYAERF GVYDRMGQFL ANALGAEETT LFKMVAAYAM FANGGERVQP TLVDRVQDRF GRTIYRHDQR ICDDCAQPLL PEGRAPHITS KRERVMDAIT AYQLTSMMEG VIKRGTGRGI NLPVPVAGKT GTTNDAKDVW FIGYTSNIVA GCYIGYDQPR SMGSASGGGF CGPVFQSFMT KAVKKYGGSE FRVPPGGYFM KIDRFTGARL PDDATGDNVV AEYFRQGEDP VFGMGAWVDG GFAMGSNLPL FAYGEEETEQ GATVTTATGE RKVIPKKADF GTLSSGGLY
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