| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_1616 |
|---|
| Symbol | |
|---|
| ID | 4897169 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17029 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009049 |
|---|
| Strand | - |
|---|
| Start bp | 1701192 |
|---|
| End bp | 1702448 |
|---|
| Gene Length | 1257 bp |
|---|
| Protein Length | 418 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640112207 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_001043498 |
|---|
| Protein GI | 126462384 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.0546554 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCAAGG TCCTCGCCGC CACCTGGCCG CTGCTGCTGG GCGTCATGCT GCTGATGGTG
GGCAATGGCG TGCAGGCCTC GCTTCTGGGC ATCCGCGGCG CTCTGGAAGG CTTTTCCACC
ACGCAGCTCG CCATCGTGAC CTCGGCCTAT TTCGCAGGCT TCCTCGTGGG CTCTCAGGTG
GCCCCCGACA TGATCCGCCG CGTGGGCCAT GTGCGCGTCT TTGCGGCGCT GGGGTCGATG
ATATCGGCGG TGCTCGTGGT CTATCCGGTG CTGCCCGACT GGACGGCCTG GACGCTGCTG
CGGGTGCTGA TCGGCTTCAG CTTCTCGGGC GTCTATATCA CGGCCGAAAG CTGGCTGAAC
AACACCGCCA CCAACGAGAC CCGCGGGCAG GCGATGTCGG CCTACATGAT GGTGCAGATG
GTGGGCATCA TCACCAGTCA GGCGCTGCTG AATGCGGCCG ATCCGTCCGG CTTCACGCTC
TTCGTGATCC CTTCGGTGCT GGTGTCGCTG GCCTTCATGC CGATCCTGCT CACCGTCACG
CCCACGCCGA CCTTCGAGAC GACGCGGCGG CTGTCGGTGC GCGACCTGTT CCGCGTGTCT
CCCCTGGGCG TGGTGGGGAT GCTGATGACG GGCGGGATCT TCTCGGCCAT GTTCGGCATG
GCCTCGGTCT GGGGCACGCT CGACGGGCTC TCGGTGCAGG AGATCTCGAT CTTCATCGGC
TCGCTCTATG TGGGCGGGCT CGTGCTGCAA TATCCGATCG GCTGGGCCTC GGACCGAATG
GACCGGCGCC AGCTGATCCT CGGGCTTGCG GTGGTGGCGG GGCTGCTCAT GGCCCTGACC
GTGGCGCTGG CGCCGCCCTT CTGGGGGCTG ATCGGGGTCG CGCTGCTTCT GGGCGGGATC
ACCAACCCGA TCTATTCGCT GCTCATCGCC CATACGAACG ATTTTCTGGG CAAGGAGGAT
ATGGCGGCGG CCTCGGCCGC GCTCCTGTTC ATGAACGGGC TCGGCGCGAT CTGCGGCCCG
CTGGTGACGG GCTGGATCAT GGAGCAGGCG GGGCCGAGCG GCTTCTTCCT CTTCATCGGC
ATCCTCTATG GCGCGATGGC GGCCTATGCC GGATGGCGGA TGACGCGGCG CGCGGCGCCC
GCGGTGGCCG ACACCGGCTC GTTCGCGACC GTGGCGCCCA CGGCCTCGTC GGTTGCGGTC
GGAGCGGTCA TGGAAGTGGT GACCGAGGCG CAGGAGGCGC AGCAGGCGGC CGAGTGA
|
|---|
| Protein sequence | MFKVLAATWP LLLGVMLLMV GNGVQASLLG IRGALEGFST TQLAIVTSAY FAGFLVGSQV
APDMIRRVGH VRVFAALGSM ISAVLVVYPV LPDWTAWTLL RVLIGFSFSG VYITAESWLN
NTATNETRGQ AMSAYMMVQM VGIITSQALL NAADPSGFTL FVIPSVLVSL AFMPILLTVT
PTPTFETTRR LSVRDLFRVS PLGVVGMLMT GGIFSAMFGM ASVWGTLDGL SVQEISIFIG
SLYVGGLVLQ YPIGWASDRM DRRQLILGLA VVAGLLMALT VALAPPFWGL IGVALLLGGI
TNPIYSLLIA HTNDFLGKED MAAASAALLF MNGLGAICGP LVTGWIMEQA GPSGFFLFIG
ILYGAMAAYA GWRMTRRAAP AVADTGSFAT VAPTASSVAV GAVMEVVTEA QEAQQAAE
|
|---|
| |