Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_1451 |
Symbol | hfq |
ID | 4897585 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009049 |
Strand | - |
Start bp | 1511768 |
End bp | 1512001 |
Gene Length | 234 bp |
Protein Length | 77 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640112039 |
Product | RNA-binding protein Hfq |
Protein accession | YP_001043333 |
Protein GI | 126462219 |
COG category | [R] General function prediction only |
COG ID | [COG1923] Uncharacterized host factor I protein |
TIGRFAM ID | [TIGR02383] RNA chaperone Hfq |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0310898 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGCCG ATAAACAAAA CTTGCAGGAC GCCTTTCTGA ACCATGTCAG GAAGGCCAAG GTTCCGGTTA CGATTTTTCT CATTAACGGT GTAAAACTGC AGGGCGTGAT TACCTGGTTC GACAATTTCT GCGTCCTGCT GCGTCGGGAC GGACAGTCGC AGCTGGTCTA CAAGCACGCG ATCTCGACCA TCATGCCCGG GCAACCGATC AATCTCTACG AGGGCGACGA CTGA
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Protein sequence | MAADKQNLQD AFLNHVRKAK VPVTIFLING VKLQGVITWF DNFCVLLRRD GQSQLVYKHA ISTIMPGQPI NLYEGDD
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