| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_1360 |
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| Symbol | |
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| ID | 4896840 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009049 |
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| Strand | - |
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| Start bp | 1414095 |
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| End bp | 1415726 |
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| Gene Length | 1632 bp |
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| Protein Length | 543 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640111947 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001043242 |
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| Protein GI | 126462128 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0151381 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACCG ACCGACTTCA TCCCGCGGCG CTCATGCACA GGACCGAAGT GGCGAGGGGC
CGCATGAGCC GACGCGAGTT CCTGACGCGG ACCACGGCGC TCGGTGTCTC GGCGGGCGCG
GCCTATGCGC TTCTGGGCCT CGCGCAGCCT GTCCGCGCGC AGGAGACACC CCGCAAGGGC
GGCACGCTCC GGATGGAGAT GGAGACGCGC GCGCTGAAGG ATCCGCGCAC CGCCGACTGG
TCGCAGATCT CGAACGTCAC GCGCGGCTGG CTCGAATATC TCGTGGAGTA TGAGGCCGAC
GGCACCTTCC GGCCGATGCT TCTCGAAAGC TGGGAGGCCA ACGACGATGC CACCGAATAT
CTGCTGAAGG TCCGCCCCGG CGTCACCTGG TCGAACGGCG ATCCCTTCAC CGCCGAGGAT
GTGCGGCACA ATTTCGAGCG CTGGTGCGAT GCCTCGGTCG AGGGCAATGC CATGGCGGCG
CAGATGACCG CCCTTCAGGC CGAGGGCAAG CTGCGCACCG ATGCCATCGA GCTGGTGGAC
GACACGACCC TGCGGCTGAA ACTCTCGCAG CCCGACATCG CGCTGATTGC GAACCTCGCC
GACTATCCGG CCGCCGTGGT TCACAAAAGC TACGAAGGCG GCGACCCCGC GGCCAATCCG
GTGGGGACCG GCCCCTACCT TCCCGAAACG ATCGAGGTCG GCATCCGCAT GGTGCTGGTG
CGCAATGAGG CCCATCCCTG GTGGGGCACG GAGGTCTATG GCGGCCCTTG GCTCGACCGG
ATCGAATATC TCGATTTCGG CTCCGATCCT TCCGCCGCGG TAGCCGCCGC GGGGTCGGGC
GAGATCGACG CGACCTATCA GAGCGTGGGT GAATTCATCG ACGTGCTCGA CTCGCTCGGC
TGGGACAAGT CCGAGGCCCG CACCGCCACG ACGCTGGCCA TCCGTTTCAA CCAGCAGGCC
GAGGAGTACA AGGACGTCCG CGTTCGCCGC GCCCTGCAGA TGGCGGTCGA CAATGAGGTG
GTTCTGGAGC TCGGCTATTC CGGGCACGGG CGGGTGGCCG AGAACCACCA TGTCTGTCCG
ATCCATCCCG AATATGCCGA GCTGCCGCCC CTGACCGTGG ACCGCGCCGC GGCGCTGGCG
CAACTGAAGG AGGCCGGCAT GGCCGAGCAC GAGTTCGAGC TCGTCTCGCT CGACGATGCC
TGGCAGGCGG CCTCCTGCGA TGCGGTGGCG GCACAGCTGC GCGATGCCGG CATCGCCATC
CGCCGCACGG TGCTTCCCGG CGCAACCTAC TGGAACGACT GGCTGAAGTT TCCCTTCTCG
GCCACGGAAT GGAACATGCG CCCGCTGGGC GTGCAGGTGC TGGCGCTCGC CTATCGCTCG
GGTGTGCCTT GGAACGAATC CGCCTTCTCG AACAAGGCGT TCGACGCGAA GCTCGATGAG
GCCATGTCGC TCGTCGACCC GGACCGGCGC CGGGTGCTGA TGGCCGATCT CGAGCGGATC
CTGCAGGAGG AGGGCGTGCT GATCCAGCCC TACTGGCGCT CGATCTTCCG CCATGTCGAT
CCCAAGGTGA AGGGAGCCGA GGCGCATCCG ACCTTCGAGC ATCACCATTA CAAATGGTGG
ATCGACGCCT GA
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| Protein sequence | MTTDRLHPAA LMHRTEVARG RMSRREFLTR TTALGVSAGA AYALLGLAQP VRAQETPRKG
GTLRMEMETR ALKDPRTADW SQISNVTRGW LEYLVEYEAD GTFRPMLLES WEANDDATEY
LLKVRPGVTW SNGDPFTAED VRHNFERWCD ASVEGNAMAA QMTALQAEGK LRTDAIELVD
DTTLRLKLSQ PDIALIANLA DYPAAVVHKS YEGGDPAANP VGTGPYLPET IEVGIRMVLV
RNEAHPWWGT EVYGGPWLDR IEYLDFGSDP SAAVAAAGSG EIDATYQSVG EFIDVLDSLG
WDKSEARTAT TLAIRFNQQA EEYKDVRVRR ALQMAVDNEV VLELGYSGHG RVAENHHVCP
IHPEYAELPP LTVDRAAALA QLKEAGMAEH EFELVSLDDA WQAASCDAVA AQLRDAGIAI
RRTVLPGATY WNDWLKFPFS ATEWNMRPLG VQVLALAYRS GVPWNESAFS NKAFDAKLDE
AMSLVDPDRR RVLMADLERI LQEEGVLIQP YWRSIFRHVD PKVKGAEAHP TFEHHHYKWW
IDA
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