| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_1342 |
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| Symbol | |
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| ID | 4896758 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009049 |
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| Strand | - |
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| Start bp | 1391649 |
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| End bp | 1392131 |
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| Gene Length | 483 bp |
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| Protein Length | 160 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640111929 |
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| Product | Holliday junction resolvase-like protein |
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| Protein accession | YP_001043224 |
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| Protein GI | 126462110 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0816] Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) |
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| TIGRFAM ID | [TIGR00250] RNAse H-fold protein YqgF |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00888056 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.184568 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATCCACG ACCGTATCGA GGATTTCCTC GCCAGCCTGC CGCGCACCGG CGCGCTCGCG
GGTCTCGATC TCGGCACCAA GACGGTGGGC GTAGCGGTGT CGGACGGGCT CAGGCGGATC
GCGACCCCGC TCCTGACCGT GCGGCGCACG AAGTTCACCG AGGATGCGGC CAAGCTCAAG
GCCATCGCCG CCGAGCGCCG GCTGGTGGGG ATCGTGCTCG GCCTGCCGCG CAACATGGAC
GGCAGCGAGG GGCCGCGCGC GCAGTCGACC CGGGCCTTCG CGCGCAATCT GGTGCAGGTG
CTGCCGCTGC CGGTGGGCTT CTGGGACGAG CGTCTGTCCA CCGTGGCGGC CGAACGGGCG
CTCCTCGAGG CGGATACGTC ACGAAAGCGT CGCGCCGAGG TGATCGATCA CGTCGCGGCG
GGCTATATCC TGCAGGGAGT GCTGGACCGT CTGGACTGGC TCGGCCGCGA GGGGGGCGCA
TGA
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| Protein sequence | MIHDRIEDFL ASLPRTGALA GLDLGTKTVG VAVSDGLRRI ATPLLTVRRT KFTEDAAKLK
AIAAERRLVG IVLGLPRNMD GSEGPRAQST RAFARNLVQV LPLPVGFWDE RLSTVAAERA
LLEADTSRKR RAEVIDHVAA GYILQGVLDR LDWLGREGGA
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