| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_1133 |
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| Symbol | |
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| ID | 4895324 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009049 |
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| Strand | + |
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| Start bp | 1177187 |
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| End bp | 1178350 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640111719 |
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| Product | HK97 family phage major capsid protein |
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| Protein accession | YP_001043015 |
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| Protein GI | 126461901 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4653] Predicted phage phi-C31 gp36 major capsid-like protein |
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| TIGRFAM ID | [TIGR01554] phage major capsid protein, HK97 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.308903 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGCAG GCCCCGATCC GGCCGTGGAG GCGAAAGCCG CAATGGCCGG TTTCCTGAAG
GAGATCAATC GCTTTCAGGA GGAGGTGAAG AATGTGCTGC AACAACAGGA AGAGCGTTTG
ACCATGCTGG ACCGCAAAAC CATGATCTAC GGGCGCCCGG CGCTGGCGGC CGCGGCCGAC
CAGGAGGCGC CGCATCGAAA GGCGTTCGGG GCCTATCTCC GCTCGGGCGA CGACGATGGT
CTGCGCGGCC TCGTCCTCGA GGGCAAGGCG ATGACGGCGA GCGTCGCCTC GGACGGCGGC
TATCTGGTCG ATCCGCAGAC CTCGGACGCC ATCCGCTCGA TGTTGCTGTC CACGGCCTCG
ATCCGTCAGA TCGCCGGTGT GGTCCATGTG GAAGCCACGA GCTTCGACGT GCTGATCGAC
CGCACTGAGG TGGGGTCGGG CTGGGCCACG GAGGCCGCCA CGATCAGCGA AAGCGCCTCG
CCCACCATCG AGCGGATCTC GATCAAGCTG CACGAACTGT CGGCGATGCC GAAGGCGAGC
CAGCGGCTGC TGGACGACTC GGCCTTCGAC GTCGAGAGCT GGCTGGCGGC CAAGATCGCG
ACGCGCTTCA TGCGGGCCGA GAGCGCGGCC TTCGTCAGCG GCGACGGGAT CGACAAGCCG
CGGGGCTTTC TGGCGCCGGC GAAGGTTGCG AACGCGAGCT GGAGCTGGGG CTCGATCGGC
TATGTCCCCT CGGGTGCGGC GAGCGATTTC CTCGCCACGA ACCCGGCCGA TTGTATCATC
ACCCTGATCT ATTCGCTCGG CGCCGATTAC CGCGCGAATG CGACCTTCGT GATGAATTCG
AAGACCGCGG GCGCGGTGCG GAAGATGAAG GACTCGGACG GCCGCTTCCT GTGGTCGGAC
GGTCTGGCCG CGGCGGAGCC TGCGCGGCTG ATGGGATATC CGGTGCTCCT CTGCGAGGAC
ATGCCGGACA TTGCCGCGGG CGCCTTTGCC ATCGCTTTCG GGGATTTCGC CGCCGGCTAC
ACGATCGCCG AGCGGCCCGA GGTGCGGGTT CTGCGCGATC CGTTCTCGGC CAAGCCCCAT
GTCCTCTTCT ATGCGACGAA GCGCGTGGGA GGCGATGTCA GCGACTATGC GGCGATCAAG
CTCCTGAAGA TCGCGGTGTC CTGA
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| Protein sequence | MSAGPDPAVE AKAAMAGFLK EINRFQEEVK NVLQQQEERL TMLDRKTMIY GRPALAAAAD
QEAPHRKAFG AYLRSGDDDG LRGLVLEGKA MTASVASDGG YLVDPQTSDA IRSMLLSTAS
IRQIAGVVHV EATSFDVLID RTEVGSGWAT EAATISESAS PTIERISIKL HELSAMPKAS
QRLLDDSAFD VESWLAAKIA TRFMRAESAA FVSGDGIDKP RGFLAPAKVA NASWSWGSIG
YVPSGAASDF LATNPADCII TLIYSLGADY RANATFVMNS KTAGAVRKMK DSDGRFLWSD
GLAAAEPARL MGYPVLLCED MPDIAAGAFA IAFGDFAAGY TIAERPEVRV LRDPFSAKPH
VLFYATKRVG GDVSDYAAIK LLKIAVS
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