| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_1115 |
|---|
| Symbol | |
|---|
| ID | 4895157 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17029 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009049 |
|---|
| Strand | + |
|---|
| Start bp | 1158750 |
|---|
| End bp | 1161365 |
|---|
| Gene Length | 2616 bp |
|---|
| Protein Length | 871 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640111701 |
|---|
| Product | maltooligosyl trehalose synthase |
|---|
| Protein accession | YP_001042997 |
|---|
| Protein GI | 126461883 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3280] Maltooligosyl trehalose synthase |
|---|
| TIGRFAM ID | [TIGR02401] malto-oligosyltrehalose synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.435651 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGTCC GCGCCACCTA CCGCATCCAG TTCACCTCCG ACTTCCGGTT CTCGGATGCG
GCACGGCTCG CGCCCTATTT CGCGCGGCTG GGGATCAGCC ATCTCTATGC CTCGCCGATC
CTCGCCGCGC GCGAGGGCTC GACCCACGGC TATGACGGGG TCCATTACAG CCTCATCAGC
CCCGATCTCG GCGGCGAGGA GGAGTTCCGC GCCATGGCCG CGACCTTCCG AGAGCACGGC
ATGGGGGTGA TCGTCGATTT CGTGCCGAAC CACATGGGCG TGGGCGGCGC GGACAATGTC
TTCTGGCTTT CGGTGCTGGA ATGGGGGCGG CAGAGCCCCG TGGCGGACTG GTTCGACATC
GACTGGGACA GCGCGACGCC GGGCCTCGCA GGGAAGGTGC TGATGCCCTT CCTCGGCGAC
CAGTATGGCG AGGTGCTGGC GCAAGGCGGG ATGGAGCTCC GCTACGAGCC CGACCGCGGC
GCCTTCGCGA TCTGGGCGCA TGACACGCAC AAGCTGCCGA TCTCTCCCCA GACCTACGCG
ACGATCCTGC GCGCGGCTCC GGGCTTCGAG GAGCTGGCCG CGGCCTTCGA GGCGGCGGGT
GCAGCAGAGC CCTCCGATCC GGTCTGGCCC GACCTGCGGC GACGGCTGCG CCAGACCGAT
CCCACGCCGG CCGTCGAGGC CTTCCGGGGC ACGCCCGGCG ATCTCGACAG CTGGGCCGCG
CTCGACCGGC TGGCCGAGGC GCAGAACTGG CGCGCGGCCA AGTTCTCCAT GGACAGCGAC
GCGATCAACT ACCGCCGCTT CTTCACCATG AGCGACCTCG CGGGCGTGCG CGTCGAGAAG
GCCGAAGTCT TCGCGGGCGT GCACCGCCTG ATCCTGCGGC TGATGGAGGA GGGCGTGGTC
GAGGGCATCC GCATCGACCA TATCGACGGG CTGGTGGATC CCAAGGGCTA CTGCCTGCGC
CTGCGCGACG CGCTCGACCG CCCGTTCCCG CTCTATGTCG AGAAGATCCT CGCCCCCGAC
GAGAGCCTGC CGGAGAGCTG GCGGGCCGAC GGCACCACGG GCTACGAGTT CGCGAACCTC
GCCGTGGGCC TCATCCTCGA CCCGGCCGCC GAAGAGGCGC TGACGCAGGT CCATGCGGAC
TTCACCGGTC AGACCGCCAG CCCCGAGGAT CTGGTCCATC AGGCCAAGCT CGAGATCATG
GCCCAGCCCA TGGCCTCCGA ACTCGAAAGC CTGACGGACC GGCTTCTGGC GCTGGTGGCC
GAGGATCCGC GGCGGCGCGA TTTCGGACGG GCGGCGGTGC GGTCGGGCCT CTCGCAGGTG
ATCGCGGCGC TCGACGTCTA CCGCACCTAT GCCGATGCCT CCGGGCTGGC CGATGCCGAC
CGGGCGCGGG TCGAGGCGGC GGTGGAGCGG GCCAAGGCCC GCGCGCCCGA GATCGACCCC
GGCATCTACG ACTTCATCGG CGCGGTGATG ACGCTGGATC TGGCCGAGGA GCAGCCCGAG
AAGCGCGACG AGATCCTGAC CCTCGTCATG CGCTTGCAGC AGTTCACCGG GCCGGTGATG
GCCAAGGGGC TCGAGGATCG GGCGCTCTAC CGCTATTCCC GCCTCATCGC GCTGAACGAG
GTGGGCAGCG AGCCCGGCCA TTTCGGCGTG AGCCTTGCGG CCTTCCATGA CGCGAACCGC
GATAGGGCCT CGCGCGAGCC GGGCGCCATG CTCACCACCT CCACCCACGA TACGAAGCGC
GGCGAGGATG CGCGGATGCG GATCGCGGCC ATCGGCAGCC ATGTGGAAGA GTGGGCGGCC
AGGGTCGAGG AATGGCACGG GATGCTCGCC TCGGACGAGG AGCCCGTGGA TCTCAGCGAG
GAATATTTCT TCTACCAGCT CCTGCTGGGC GTCTGGCCGA TGGACTGGGC CGAGGCGCCG
GAGGCTCAGG ATCTCGCGGC CCTGCGCGAG CGGGTCGAAG CGGCCATGCT GAAGTCGATC
CGCGAGGCCG CGGTCAACAG CCGCTGGGTC TTCGGCAACG AAGCCTATGA GGCGGCCTTC
TGCGCCTTCA TCGCGCGCGC CCTGGGCACG CCCGACAGCG CCTTCCTGCG CTCCTTCCTG
GCCTTCCATG GCCGCATCGC TCCGCAGGCG CTGGGGAACA TCCTCGTTCA GACCGTGCTG
AAGCTGACGG TGCCCGGCAT GCCCGACACC TATCAGGGCG CGGAGCTCTG GGAGCAGAGC
CTTGTCGATC CCGACAACCG CCGCCCGGTG GATTTCGCGC TTCGCGAACG GATGCTGCTG
GAGACGCAGG AGAAAGCGCC GGCGGATGTG CCATCGGAGG AGGGGGCGGT GAAGCTCGCG
CTGACCGCGC GGCTTCTGGC GCTCCGGGCC GAGCTGCCGG ATCTCTTCGC GCGCGGCAGC
TACGAGCCCG TGGAGGCGGG CGAGGGGATC TGCGCCTTCC TGCGCGCGGG TGACGGCGCG
CGGATGCTCG TGGCCTGCCG TCTGAACCGG GCCGCCCACC CCGCCGAGGG GATGAGCCTC
CCGGAAGGCC GGTGGCAGGA TCTGGTGACC GGTGCCGAGG CCAGCGGCAG GCTCGCCTTC
GGCCAGCTGC CGGTGGCGGT GCTGATAGAC CGGTAA
|
|---|
| Protein sequence | MSVRATYRIQ FTSDFRFSDA ARLAPYFARL GISHLYASPI LAAREGSTHG YDGVHYSLIS
PDLGGEEEFR AMAATFREHG MGVIVDFVPN HMGVGGADNV FWLSVLEWGR QSPVADWFDI
DWDSATPGLA GKVLMPFLGD QYGEVLAQGG MELRYEPDRG AFAIWAHDTH KLPISPQTYA
TILRAAPGFE ELAAAFEAAG AAEPSDPVWP DLRRRLRQTD PTPAVEAFRG TPGDLDSWAA
LDRLAEAQNW RAAKFSMDSD AINYRRFFTM SDLAGVRVEK AEVFAGVHRL ILRLMEEGVV
EGIRIDHIDG LVDPKGYCLR LRDALDRPFP LYVEKILAPD ESLPESWRAD GTTGYEFANL
AVGLILDPAA EEALTQVHAD FTGQTASPED LVHQAKLEIM AQPMASELES LTDRLLALVA
EDPRRRDFGR AAVRSGLSQV IAALDVYRTY ADASGLADAD RARVEAAVER AKARAPEIDP
GIYDFIGAVM TLDLAEEQPE KRDEILTLVM RLQQFTGPVM AKGLEDRALY RYSRLIALNE
VGSEPGHFGV SLAAFHDANR DRASREPGAM LTTSTHDTKR GEDARMRIAA IGSHVEEWAA
RVEEWHGMLA SDEEPVDLSE EYFFYQLLLG VWPMDWAEAP EAQDLAALRE RVEAAMLKSI
REAAVNSRWV FGNEAYEAAF CAFIARALGT PDSAFLRSFL AFHGRIAPQA LGNILVQTVL
KLTVPGMPDT YQGAELWEQS LVDPDNRRPV DFALRERMLL ETQEKAPADV PSEEGAVKLA
LTARLLALRA ELPDLFARGS YEPVEAGEGI CAFLRAGDGA RMLVACRLNR AAHPAEGMSL
PEGRWQDLVT GAEASGRLAF GQLPVAVLID R
|
|---|
| |