| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_1103 |
|---|
| Symbol | |
|---|
| ID | 4895120 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17029 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009049 |
|---|
| Strand | - |
|---|
| Start bp | 1137830 |
|---|
| End bp | 1138429 |
|---|
| Gene Length | 600 bp |
|---|
| Protein Length | 199 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640111689 |
|---|
| Product | chemoreceptor glutamine deamidase CheD |
|---|
| Protein accession | YP_001042985 |
|---|
| Protein GI | 126461871 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG1871] Chemotaxis protein; stimulates methylation of MCP proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.766752 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCGTT GCGACGACAG GCCTTCAGCC AGCCAGATAA GCATCACACA TGTGACCCAA
GGAAGCTGTG TTGCCTCCGC ATCCCCGAAC GAGGTCTATG CGACGATCCT TGGGTCCTGC
ATCTGCACCT GCATGTGCGA TCCGGTGGCC GGCGTGGGAG GGATGAACCA CTTCCTGTTG
CCTTCAGCCG ACGTCGAAGA TGCCCAGCAC CTCCGTTACG GCTCCCATGC AATGGAACTG
CTGATCAATG CGCTTCTCAA GCTGGGCGCC GCCCGGCAGC GGATAGAAGC CAAGATCTTC
GGCGGCGCAA TGATGACGCC GCAGCTGGGG GCGATCGGTC AAGCAAATGC TGCTTTCGCC
CGGCGCTATC TCAGAGATGA GGGGATCCGC TGCACGGCTC ACAGTCTGGG GGGCAATCGG
GCCAGGCGCA TCCGGTTCTG GCCCAAAACG GGGCGCGTCC AGCAGATGTT CTTGGGCAGC
GAGGATGTGG TGCCGAACGA ACAACCGCAA TTCCGCCTTC AGGGTGGCGC CGGCGACGTC
ACCTTCTTCG ACCGACATAA CAACGCCGAA ATGCCCGATC CGATCAAGGA ACCGAGATGA
|
|---|
| Protein sequence | MTRCDDRPSA SQISITHVTQ GSCVASASPN EVYATILGSC ICTCMCDPVA GVGGMNHFLL
PSADVEDAQH LRYGSHAMEL LINALLKLGA ARQRIEAKIF GGAMMTPQLG AIGQANAAFA
RRYLRDEGIR CTAHSLGGNR ARRIRFWPKT GRVQQMFLGS EDVVPNEQPQ FRLQGGAGDV
TFFDRHNNAE MPDPIKEPR
|
|---|
| |