Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_1089 |
Symbol | |
ID | 4897102 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009049 |
Strand | + |
Start bp | 1123080 |
End bp | 1123589 |
Gene Length | 510 bp |
Protein Length | 169 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640111675 |
Product | CarD family transcriptional regulator |
Protein accession | YP_001042971 |
Protein GI | 126461857 |
COG category | [K] Transcription |
COG ID | [COG1329] Transcriptional regulators, similar to M. xanthus CarD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0349811 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCAAGA CCAAGAAGCC CGAATTTCGC CCCAATGAGT TCGTTGTCTA CCCGGCGCAT GGCGTCGGCC GGATCATCTC GATCGAGGAG CAGGAGATCG CCGGCATCCG CCTCGAGCTG TTCGTGATCT CGTTCGAGAA GGACAAGATG ACGCTGCGCG TGCCCACGCA CAAGGCCACC GAGGTGGGGA TGCGCTCGCT CTCCACGCCC GATGTGGTGA CCAAGGCGCT CGACACGCTC AAGGGCAAGG CGAGGGTCAA GCGCGCCATG TGGTCGCGCC GGGCGCAGGA ATATGAACAG AAGATCAATT CCGGCGATCT CATGTCGATC GCCGAGGTGG TGCGCGACCT GCACCGGACC GACGACCAGC GCGAGCAGTC CTATTCCGAA CGCCAGCTCT ACGAGGCGGC GCTCGAGCGG CTGACCCGCG AAGTGGCGGC AGTCTCGGGC GTGGACGAGG CCGGCGCCCA GAAGGCCGTC GACGCGGTCC TCGTCTCCCG CGCGGCCTGA
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Protein sequence | MTKTKKPEFR PNEFVVYPAH GVGRIISIEE QEIAGIRLEL FVISFEKDKM TLRVPTHKAT EVGMRSLSTP DVVTKALDTL KGKARVKRAM WSRRAQEYEQ KINSGDLMSI AEVVRDLHRT DDQREQSYSE RQLYEAALER LTREVAAVSG VDEAGAQKAV DAVLVSRAA
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