Gene Rsph17029_1089 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_1089 
Symbol 
ID4897102 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009049 
Strand
Start bp1123080 
End bp1123589 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content66% 
IMG OID640111675 
ProductCarD family transcriptional regulator 
Protein accessionYP_001042971 
Protein GI126461857 
COG category[K] Transcription 
COG ID[COG1329] Transcriptional regulators, similar to M. xanthus CarD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0349811 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAAGA CCAAGAAGCC CGAATTTCGC CCCAATGAGT TCGTTGTCTA CCCGGCGCAT 
GGCGTCGGCC GGATCATCTC GATCGAGGAG CAGGAGATCG CCGGCATCCG CCTCGAGCTG
TTCGTGATCT CGTTCGAGAA GGACAAGATG ACGCTGCGCG TGCCCACGCA CAAGGCCACC
GAGGTGGGGA TGCGCTCGCT CTCCACGCCC GATGTGGTGA CCAAGGCGCT CGACACGCTC
AAGGGCAAGG CGAGGGTCAA GCGCGCCATG TGGTCGCGCC GGGCGCAGGA ATATGAACAG
AAGATCAATT CCGGCGATCT CATGTCGATC GCCGAGGTGG TGCGCGACCT GCACCGGACC
GACGACCAGC GCGAGCAGTC CTATTCCGAA CGCCAGCTCT ACGAGGCGGC GCTCGAGCGG
CTGACCCGCG AAGTGGCGGC AGTCTCGGGC GTGGACGAGG CCGGCGCCCA GAAGGCCGTC
GACGCGGTCC TCGTCTCCCG CGCGGCCTGA
 
Protein sequence
MTKTKKPEFR PNEFVVYPAH GVGRIISIEE QEIAGIRLEL FVISFEKDKM TLRVPTHKAT 
EVGMRSLSTP DVVTKALDTL KGKARVKRAM WSRRAQEYEQ KINSGDLMSI AEVVRDLHRT
DDQREQSYSE RQLYEAALER LTREVAAVSG VDEAGAQKAV DAVLVSRAA