| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_1076 |
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| Symbol | |
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| ID | 4897401 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009049 |
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| Strand | - |
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| Start bp | 1110476 |
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| End bp | 1112077 |
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| Gene Length | 1602 bp |
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| Protein Length | 533 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640111663 |
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| Product | ATP-dependent DNA ligase |
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| Protein accession | YP_001042959 |
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| Protein GI | 126461845 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1793] ATP-dependent DNA ligase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCGGT TCGCGGCCCT CTTCGACCTC CTCGACCGCA CGACGCGCAC CTCCGCGAAG
GTGGCGGCGC TCGCCGACTA TTTCCGCACC GCGCCTGAGG AGGACCGGGT CTGGACCATC
GGCCTCCTCT CGGGCCGCCG CCCCAAGCGG GCGGTGAACA CGACCGAACT CCGCAGCTGG
GCGGCCGAGG CATCGGGTCT GCCGGTCTGG CTCGCCGAGG AGGTCCATCC GATCGTGGGC
GATCTGGCCG AGACGATCTC GCTCCTCCTG CCCGAGCCTA GCCAGACCAG CGACCGCACG
CTCGACGGCT GGATGCGCGA ACTGGTTTCC CTCACAGGCC GACCCGCCGA GGTGCGCCGG
GCCGCCATCC TCGACGCCTG GGACCGGCTC AGCACGCCCG AGCGGTTCCT CTTCAACAAG
CTCATCACCG GCGGTTTCCG CATGGGCGTG AGCCAGGGGC TGATGACGCG CGCGCTGGCG
CAGGCGACCG GCGTCGACGA GGCGGTGCTG GCGCACCGGC TGATGGGCGA CTGGAAGCCC
GGCCGGATCG GCTTCGAGAC GCTGATCGGC GCGCACGATC CCGAGGCCGA TGCCTCGAAA
CCCTATCCGT TCGCGCTCGC CTCGCCGGTC GAGGAGGTGG CGGCGCTGGG AGATCCCGCC
GACTGGCTTG CGGAATGGAA ATGGGATGGC ATCCGCGGCC AGCTCGTGAA CCGCGCGGGC
GCCTTCGCGC TCTGGTCGCG CGGCGAGGAG CTGGTGACGG ACCGTTTCCC CGACCTGGCC
CCGCTCCGGG ATTTCCTGCC CCCCGGCCTC GTGATCGATG CCGAGGTGCT GGCCTGGGGC
GGCGACGGCC CCCTGCCCTT CGCCGCGCTC CAGAAGCGGA TCGGCCGCCT CACCGTGCCG
AAGAAGATCC TCGCCGAGGC GCCCGCGCAT CTGCTGGCCT ACGATCTTCT GGAGGAAAAC
GGCGAGGATC TGCGCGCGGC CCCGCTCGCG CACCGTCGCG CCCGGCTCGA AGCGGTGCTG
GCAGCCCTGC CCCCGGGCGT GCCGATCTCG CCCTCGCCGC TGGTGGCCTT CGACGACTGG
GAGACGCTGG GCGGGATCCG CGCCACGGCG CGCGAGAAGA TCGCCGAGGG GCTGATGCTG
AAGCGCGCCT CCTCGCCCTA TTTCGTCGGC CGCAAGCGCG GCGACTGGTG GAAATGGAAG
CTCGATCCCT ATACGGTCGA TGCGGTCATG CTCTATGCGC AGCAGGGCGC GGGCCGCCGC
GCCACGCTCT TCACCGACTT CACCTTCGGC GTGCGCGACG GCGACGATCT CGTGCCCTTC
ACCAAGGCCT ATTCCGGCCT CACCGATGCC GAGTTCCGCC AGATCACCGA CTGGGTGCGG
AAGAACACGC TGGAGCGGTT CGGACCCGTC CGGCGCGTCC CGCCCGAGCT GGTCTTCGAG
CTGGCCTTCG AGGGCATTCA GGCCAGCCCC CGCCACAAGT CGGGCATCGC GCTCCGCTTC
CCGCGCATGG TGCGCTGGCG GAAGGACAAA CCCGCAGCCG AGATCGACAC GCTCGAAAGC
CTGCGCGAAC TGCTCGCAGC GACGGGCGGG GCGGCCCCAT GA
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| Protein sequence | MKRFAALFDL LDRTTRTSAK VAALADYFRT APEEDRVWTI GLLSGRRPKR AVNTTELRSW
AAEASGLPVW LAEEVHPIVG DLAETISLLL PEPSQTSDRT LDGWMRELVS LTGRPAEVRR
AAILDAWDRL STPERFLFNK LITGGFRMGV SQGLMTRALA QATGVDEAVL AHRLMGDWKP
GRIGFETLIG AHDPEADASK PYPFALASPV EEVAALGDPA DWLAEWKWDG IRGQLVNRAG
AFALWSRGEE LVTDRFPDLA PLRDFLPPGL VIDAEVLAWG GDGPLPFAAL QKRIGRLTVP
KKILAEAPAH LLAYDLLEEN GEDLRAAPLA HRRARLEAVL AALPPGVPIS PSPLVAFDDW
ETLGGIRATA REKIAEGLML KRASSPYFVG RKRGDWWKWK LDPYTVDAVM LYAQQGAGRR
ATLFTDFTFG VRDGDDLVPF TKAYSGLTDA EFRQITDWVR KNTLERFGPV RRVPPELVFE
LAFEGIQASP RHKSGIALRF PRMVRWRKDK PAAEIDTLES LRELLAATGG AAP
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