Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_1073 |
Symbol | |
ID | 4897060 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009049 |
Strand | + |
Start bp | 1106158 |
End bp | 1107054 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640111660 |
Product | RNA polymerase factor sigma-32 |
Protein accession | YP_001042956 |
Protein GI | 126461842 |
COG category | [K] Transcription |
COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
TIGRFAM ID | [TIGR02392] alternative sigma factor RpoH [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.293042 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACTT ACACCAGCCT TCCCGCTCCG AGTCCCGAAC AGGGCCTCAA CCGCTACATG CAGGAGATCC GCAAGTTCCC CCTGCTGGAG CCCGAAGAGG AATATATGCT GGCCAAGCGC TGGGTCGACC ATCAGGACAA TCGGGCCGCG CACAAGCTGG TCACCTCGCA CCTGCGCCTC GCGGCCAAGA TCGCCATGGG CTACCGGGGC TACGGCCTGC CGCAGGCCGA GGTGATCTCC GAGGCGAACG TGGGCCTGAT GCAGGCGGTG AAGCGGTTCG ACCCCGAGAA GGGCTTCCGG CTGGCCACCT ATGCGATGTG GTGGATCCGC GCCTCGATCC AGGAATATAT CCTGCGGTCC TGGAGCCTCG TGAAGCTCGG CACCACCTCG GCGCAGAAGA AGCTGTTCTT CAACCTGCGC AAGGCCAAGG CCAAGCTCGG CGCGCTCGAG GAGGGTGACC TGCGCCCCGA GAACGTGGCC CAGATCGCCA AGGATCTCGG CGTGTCCGAG ACCGAGGTCA TCGACATGAA CCGCCGCCTG TCGGGGTCGG ACGCGTCGCT GAACGCGACC ATCGGCTCGG ACGGCGAGGG CTCGACCCAG TGGCAGGACT GGCTCGAGGA TGAAGACAGC GACCAGGCGG CGGATTATGC CGAGCGCGAC GAGCTCGAGA TCCGGCGCGA GCTTCTGGCG CAGTCGATGT CGGTGCTGAA CGACCGCGAG AAGGATATTC TCGTGCAGCG TCGCCTGACC GACGATCCGG TGACGCTCGA GGAGCTGTCC GAGGGCTACG GCGTCAGCCG CGAGCGGATC CGCCAGATCG AGGTCCGCGC CTTCGAGAAG CTTCAGGCCA AGATGCGCGA GCTGGCGCGG TCGAAGGGCA TGACCATCCC CGCCTGA
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Protein sequence | MSTYTSLPAP SPEQGLNRYM QEIRKFPLLE PEEEYMLAKR WVDHQDNRAA HKLVTSHLRL AAKIAMGYRG YGLPQAEVIS EANVGLMQAV KRFDPEKGFR LATYAMWWIR ASIQEYILRS WSLVKLGTTS AQKKLFFNLR KAKAKLGALE EGDLRPENVA QIAKDLGVSE TEVIDMNRRL SGSDASLNAT IGSDGEGSTQ WQDWLEDEDS DQAADYAERD ELEIRRELLA QSMSVLNDRE KDILVQRRLT DDPVTLEELS EGYGVSRERI RQIEVRAFEK LQAKMRELAR SKGMTIPA
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