| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_1021 |
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| Symbol | |
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| ID | 4895568 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009049 |
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| Strand | + |
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| Start bp | 1054408 |
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| End bp | 1054950 |
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| Gene Length | 543 bp |
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| Protein Length | 180 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640111607 |
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| Product | cold-shock DNA-binding domain-containing protein |
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| Protein accession | YP_001042904 |
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| Protein GI | 126461790 |
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| COG category | [K] Transcription |
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| COG ID | [COG1278] Cold shock proteins |
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| TIGRFAM ID | [TIGR02381] cold shock domain protein CspD |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0436807 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGGAAG ACGAAAAGGC CCTGCAGCTT GTGCATGGCC GCGTGAAATG GTTCGATCCG
GCCAAGGGCT TCGGGTTCAT TGTGACCGAG GAGAATGGGG CCGACATCCT GCTCCATGCC
AATGTCCTGC GGAACTACGG CCAGAGCTCG GTGGCGGACG GCGCCGGCAT CACCGTCAAG
GTCCAGAGCA CCCAGCGCGG CGTTCAGGCT GTCGAAGTGA TCGAGATCGA GCCTCCGGAA
GGAACGACCT TCCACCTCAG CGAGGACAGC GAAGCGACGA CCCCCGAGGA GATCGCCGCG
CGTCCGCTGG AGCCCGGCCG GGTGAAATGG TTCGACAAGG GCAAGGGCTT CGGCTTCGCC
AATGTCTTCG GCCGGCCCGA GGATGTCTTC ATTCATGTTG AGGTCCTGCG GATGTCCGGC
TTTGCCGACC TTGCGGCAGG CGAGGCGGTG GCGCTGCGCA TCATCGAGGG GCGGCGCGGG
CGCATGGCGG TGCAGGTGGT CTCATGGGAA GTCGCAGCGC GTCAGCATCA GCAACCGGCC
TGA
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| Protein sequence | MVEDEKALQL VHGRVKWFDP AKGFGFIVTE ENGADILLHA NVLRNYGQSS VADGAGITVK
VQSTQRGVQA VEVIEIEPPE GTTFHLSEDS EATTPEEIAA RPLEPGRVKW FDKGKGFGFA
NVFGRPEDVF IHVEVLRMSG FADLAAGEAV ALRIIEGRRG RMAVQVVSWE VAARQHQQPA
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