Gene Rsph17029_0996 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_0996 
Symbol 
ID4897345 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009049 
Strand
Start bp1029101 
End bp1029607 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content63% 
IMG OID640111582 
Producttripartite ATP-independent periplasmic transporter DctQ 
Protein accessionYP_001042879 
Protein GI126461765 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG4665] TRAP-type mannitol/chloroaromatic compound transport system, small permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCGGG CCCTTGTCGC CTTCGTCCGG CTGATCGACC GGCTGAACTA CGGGATCGGC 
CGCTTCGCCA TGTATCTGCT GTTCGTCCTG ATGGGCGTGC TGCTCTGGTC CTCGGTCTCG
AAGGTCTTCT TCAACCCGTC GCTCTGGACG CTCGAGATGG CCCAGTTCGT GATGGTGGCC
TATTTCATCC TCGGCGGGCC CTATTCGCTG CAGATGGGCA GCCATGTGCG GATGGACCTG
CTCTATGCCG ACTGGCCGCT GCGCAAGAAG AGCTGGTGGG ACGCGATCAC GATCTTCGCC
GTGATCCTCT ATCTCGGCGT GATGCTCTGG GGCGCGGTCG ACAGCACCCT CTATTCGCTG
CAGTACAACG AGCGCAGCCC GACCGCCTGG CGCCCCTATC TCTGGCCCAT CAAGATCGTG
ATGTGCGTGG GCTTCGTCCT GATGATCCTG CAATGTCTCG CGATCCTCGT CCGCGACATC
GCCACGCTGC GCGGGAAGAC GATCTGA
 
Protein sequence
MPRALVAFVR LIDRLNYGIG RFAMYLLFVL MGVLLWSSVS KVFFNPSLWT LEMAQFVMVA 
YFILGGPYSL QMGSHVRMDL LYADWPLRKK SWWDAITIFA VILYLGVMLW GAVDSTLYSL
QYNERSPTAW RPYLWPIKIV MCVGFVLMIL QCLAILVRDI ATLRGKTI