Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_0996 |
Symbol | |
ID | 4897345 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009049 |
Strand | - |
Start bp | 1029101 |
End bp | 1029607 |
Gene Length | 507 bp |
Protein Length | 168 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640111582 |
Product | tripartite ATP-independent periplasmic transporter DctQ |
Protein accession | YP_001042879 |
Protein GI | 126461765 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG4665] TRAP-type mannitol/chloroaromatic compound transport system, small permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGCGGG CCCTTGTCGC CTTCGTCCGG CTGATCGACC GGCTGAACTA CGGGATCGGC CGCTTCGCCA TGTATCTGCT GTTCGTCCTG ATGGGCGTGC TGCTCTGGTC CTCGGTCTCG AAGGTCTTCT TCAACCCGTC GCTCTGGACG CTCGAGATGG CCCAGTTCGT GATGGTGGCC TATTTCATCC TCGGCGGGCC CTATTCGCTG CAGATGGGCA GCCATGTGCG GATGGACCTG CTCTATGCCG ACTGGCCGCT GCGCAAGAAG AGCTGGTGGG ACGCGATCAC GATCTTCGCC GTGATCCTCT ATCTCGGCGT GATGCTCTGG GGCGCGGTCG ACAGCACCCT CTATTCGCTG CAGTACAACG AGCGCAGCCC GACCGCCTGG CGCCCCTATC TCTGGCCCAT CAAGATCGTG ATGTGCGTGG GCTTCGTCCT GATGATCCTG CAATGTCTCG CGATCCTCGT CCGCGACATC GCCACGCTGC GCGGGAAGAC GATCTGA
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Protein sequence | MPRALVAFVR LIDRLNYGIG RFAMYLLFVL MGVLLWSSVS KVFFNPSLWT LEMAQFVMVA YFILGGPYSL QMGSHVRMDL LYADWPLRKK SWWDAITIFA VILYLGVMLW GAVDSTLYSL QYNERSPTAW RPYLWPIKIV MCVGFVLMIL QCLAILVRDI ATLRGKTI
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