| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_0954 |
|---|
| Symbol | |
|---|
| ID | 4895369 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17029 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009049 |
|---|
| Strand | - |
|---|
| Start bp | 981366 |
|---|
| End bp | 983327 |
|---|
| Gene Length | 1962 bp |
|---|
| Protein Length | 653 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640111540 |
|---|
| Product | AMP-dependent synthetase and ligase |
|---|
| Protein accession | YP_001042837 |
|---|
| Protein GI | 126461723 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1022] Long-chain acyl-CoA synthetases (AMP-forming) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGAAA CGGGGGACCT CGTCTCGATT CCGGCGCTGC TGCACAGGAA CGCCACCGCG
TTCCCGCGAC AGCCCGCCTA TCGGGAGAAG GAATTCGGCA TCTGGCAGGT CTGGAACTGG
GCGGAGGCGG CGTCCGAGAT CCGCGCCATC GCGCTGGGCT TCCTCGCGCT CGGCATGCAG
CGGGGCGACC ATGTGGCGGT GGTGGGGCGC AATCGCCCGG CGCTCTACTG GTCGATGGTG
GCGGCGCAGA TGTGCGGCGC GGTGCCCGTG CCCCTCTATC AGGACGCGGT CGCCGAGGAG
ATGGTCTATG TGCTCGACCA TTGCGGCGCG CGCTTCGTCA TCTGCGGCGA TCAGGAGCAG
GTCGACAAGG TCATCGAGGT GCAGGACCGG ATCCACCATA TCGAGCAGGT GGTCTATGTC
GACAAGCGGG GCATGCGGAA GTACGACCAT TCCCGCATGA ACTGGCTCGA GGATGTGGTG
GCCGAGGGCC GCGCCGCCCA TCGCCGCTTC GACGAAGAGC TCGACCGCCG GATCGCCGAG
CTTGAATACG ATTCGACCTG CGTGATGCTC TATACCTCAG GGACGACCGG CAAGCCCAAG
GGCGTGGTCC TGTCGAACCG CAACATCATC GAGACCTCGA AGAATTCGGT CGCGTTCGAC
GGCCTGCGCC CCGGAGACGA GGTGCTGGCC TATCTGCCGA TGGCCTGGGT CGGCGATTTC
ATCTTCTCGG TCGGTCAGGC GATGTGGACG GGCTTCTGCG TGAACTGCCC CGAGAGCGCG
ACCACCATGA TGAACGATCT GCGCGAGATC GGGCCCACCT ATTTCTTCGC CCCGCCGCGC
GTCTTCGAGG GCCAGCTCAC CAATGTGATG ATCCGGATGG AGGATGCGGG CCGGATCAAG
AAGGCGCTCT TCCGGCACTA TATGGAGGTG GCCCGCCGGG TGGGCCCCGC GATCCTCGAC
GGCAGACCCG TGAGCACCGC AGACCGGATC GCCTACTGGA TCGGCGACAA GCTGATCTAC
GGGCCGCTGA AGAACACGCT CGGCTTCTCG CGCGTGCGGG TGGGCTATAC CGCGGGAGAG
GCCATCGGGC CCGAGATCTT CGACTTCTAC CGTTCGCTCG GCATCAACCT GAAGCAGCTC
TACGGCCAGA CCGAGGCCTC GGTCTTCATC ACCCAGCAGC CCGACGGGCA GGTGCGTTCG
GACACGGTGG GCGTGCCCTC GCCCGGCGTC GAGGTGCGGA TCGCAGAGAC CGGCGAGGTC
TTCTACCGCT CGCCCGGCAC CTTCGTGGCC TATTACAAGA ACCCCGAAAG CACCGCCTCG
ACCAAGGACG CCGAGGGCTG GGTCGCCACC GGCGACGCGG GCTTCTTCGA GGAGGCCACC
GGCCACCTGC GGATCATCGA CCGCGCCAAG GACGTGGGCA AGATGGCCGA CGGGCGGCTC
TTCGCGCCGA AATATGTCGA GAACAAGCTG AAGTTCTATC CCTCGATCCT CGAGGCCGTG
GTCTTCGGCA ACGGGCGCGA GCGCTGCACC GCCTTCCTCA ACATCGACCT CGCCGCCGTG
GGCAACTGGG CCGAGCGCAA CAACATCGCC TATTCCTCCT ATCAGGAGCT GGCGGGCCAC
CCGAAGGTCT ACGAGATGAT GAAGGGCCAT GTGGAGGAGG TGAACCGCTC CGTGGCCGAG
GATCCGATGC TGTCGGGCTG CCAGATCCAC CGCTTCCTGA TCCTGCACAA GGAGCTGGAC
GCCGACGATG GCGAGATGAC CCGCACCCGC AAGGTGCGCC GCAAGGTGAT CGAGGAGAAA
TACGACGACC TGATCGCTGC GCTCTACGAC GGGCGAACCA GCATCCACAC CGAGACCGAG
GTCACCTACG AGGACGGCCG CAAGGGCGCG ATCCGCGCCA CGCTGAGGAT CGAGGACGCC
GCCACCCACG GCGCCTCCGC GCAGAGGATG GCTGCCGAAT GA
|
|---|
| Protein sequence | MAETGDLVSI PALLHRNATA FPRQPAYREK EFGIWQVWNW AEAASEIRAI ALGFLALGMQ
RGDHVAVVGR NRPALYWSMV AAQMCGAVPV PLYQDAVAEE MVYVLDHCGA RFVICGDQEQ
VDKVIEVQDR IHHIEQVVYV DKRGMRKYDH SRMNWLEDVV AEGRAAHRRF DEELDRRIAE
LEYDSTCVML YTSGTTGKPK GVVLSNRNII ETSKNSVAFD GLRPGDEVLA YLPMAWVGDF
IFSVGQAMWT GFCVNCPESA TTMMNDLREI GPTYFFAPPR VFEGQLTNVM IRMEDAGRIK
KALFRHYMEV ARRVGPAILD GRPVSTADRI AYWIGDKLIY GPLKNTLGFS RVRVGYTAGE
AIGPEIFDFY RSLGINLKQL YGQTEASVFI TQQPDGQVRS DTVGVPSPGV EVRIAETGEV
FYRSPGTFVA YYKNPESTAS TKDAEGWVAT GDAGFFEEAT GHLRIIDRAK DVGKMADGRL
FAPKYVENKL KFYPSILEAV VFGNGRERCT AFLNIDLAAV GNWAERNNIA YSSYQELAGH
PKVYEMMKGH VEEVNRSVAE DPMLSGCQIH RFLILHKELD ADDGEMTRTR KVRRKVIEEK
YDDLIAALYD GRTSIHTETE VTYEDGRKGA IRATLRIEDA ATHGASAQRM AAE
|
|---|
| |