Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_0923 |
Symbol | |
ID | 4895144 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009049 |
Strand | - |
Start bp | 948819 |
End bp | 950039 |
Gene Length | 1221 bp |
Protein Length | 406 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640111508 |
Product | major facilitator transporter |
Protein accession | YP_001042806 |
Protein GI | 126461692 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.311973 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.133556 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAACAGC CCCGGCTCGC CCTTGCCTTC ATCCTGATCA CCGTGGCGCT CGACGCGATC GGGATCGGGC TGATCTTTCC CGTGATGCCC GACCTCATCC TCGAGATCAC GGGCCAGCCG CTGTCCGAGG CGGCGGTCTG GGGCGGCCTT CTGTCGGCCT CCTTCGCCGT GATGCAGTTC CTGTTCGGCC CGACCATCGG CAGCCTCTCC GACCGGTTCG GCCGGCGGCC GATCCTGCTC GGCTCGCTCG TCCTCATGTC GGGCACCTAT CTCGCCATGG CGCTCGCCCC CACGATGGCG ATCCTGCTCG CAGCGAGGAT CGTGGCGGGC ATCGTCTCGG CCACCTATGC CACCGCCTCG GCCTTCATCG CCGACGTGAC CCCGCCCGAG GACCGCGGCA AGCGCTTCGC CCTCGTGGGC GCAGGCTTCG GGATCGGCTT CGTGCTGGGG CCGGCGCTGG GTGGCCTTCT GGCGGGGCTC GACACGCGCG CGCCCTTCTA TGCGGCGGCG CTGATGGCGC TGCTCAACCT CGGGCTCGGA AGCCTGATCC TGCCCGAGAC GGTGACGGAC GCCACCCGCC GCGCCTTCAC GCTCTCGCGC GCGAACCCTC TGGGCGCCCT CCGCGCGGTC GCCCGCTTGC CGGGCCTCAG CCGCCCGCTC GCCGTGTTCC TGATCCTCGG GATCGCCATG AACGTCTATC CGGCGGTCTG GGCCTTCTAT GGACAGGCGC AGTTCGGCTG GGGCGCGGGC ATGGTCGGGG CGTCCCTCGC GCTCTACGGC ATCAGCTTTG CGGTGGGACA GGTGGCGCTG GTGGGGCCGG CGATCCGGCA CCTCGGCGAG CACCGCACGG CGCTGGTAGG GATCTGGGTC GACATCGTCA CCCTGGCGAT TCTGGGCGTC CTTGCATCCG GCACGGGGGT GCTCTTTCTC ATCCCGGTGA CGGCGCTCGG CGGCGTGGTG GTGCCCGCGC TCCAGTCCAT CCTGTCGCGC GCCACTCCGG CGGATGCGCA GGGCGAGCTG CAGGGCGTGC TGGCCTCGCT GAACGCCATC GCCATGATCG CCTCGCCGCT GGTCATGACC GCGACCTTCC GCGCCTTCAC CGCGCCGGGC GCGCCGCTGC ACCTGCCCGG CGCGCCGTTC CTGCTCGCCT CGCTGCTGAT GGTGGGCGCA CTGGCGCTGC ACGTCCGGGG CGCGGGACAG CCGGAGAGGG ACACGGCCTG A
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Protein sequence | MQQPRLALAF ILITVALDAI GIGLIFPVMP DLILEITGQP LSEAAVWGGL LSASFAVMQF LFGPTIGSLS DRFGRRPILL GSLVLMSGTY LAMALAPTMA ILLAARIVAG IVSATYATAS AFIADVTPPE DRGKRFALVG AGFGIGFVLG PALGGLLAGL DTRAPFYAAA LMALLNLGLG SLILPETVTD ATRRAFTLSR ANPLGALRAV ARLPGLSRPL AVFLILGIAM NVYPAVWAFY GQAQFGWGAG MVGASLALYG ISFAVGQVAL VGPAIRHLGE HRTALVGIWV DIVTLAILGV LASGTGVLFL IPVTALGGVV VPALQSILSR ATPADAQGEL QGVLASLNAI AMIASPLVMT ATFRAFTAPG APLHLPGAPF LLASLLMVGA LALHVRGAGQ PERDTA
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