Gene Rsph17029_0888 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_0888 
Symbol 
ID4897908 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009049 
Strand
Start bp910051 
End bp910659 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content76% 
IMG OID640111473 
Productpeptidase M22, glycoprotease 
Protein accessionYP_001042771 
Protein GI126461657 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1214] Inactive homolog of metal-dependent proteases, putative molecular chaperone 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0332753 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCGGCCTG AGCCCGCGAT CCTGGCCTTC GACACGTCGG CCGCGCATTG CGCGGCCGCG 
TTGCTTTCGG GGGACCGGCT GCTCGCCCTC CGGACCGAAC CGATGGAGAA GGGCCAGGCC
GAGCGGCTGA TGCCGCTCTT GGAGGAGGTT CTGGCCGAGG GAAGCCTGGG CTGGGCCGAT
CTCGACGCGC TGGCGGTGGG GACCGGGCCC GGCAATTTCA CCGGGGTGCG GATCGCGGTC
GCGGCCGCGC GGGGACTGGC GCTCGCGCTG GGGAAGCCGG CCCTGGGCGT CTCGCGGTTC
GAGGCTCTGG CGCTGGGTCT GCCCGCGCCG GTGGCGGTGC TCGAGGATGC GCGGCGGGGC
GAGGTCTATC TGGCCGACGG GGCCCTGCCG CCACGGCTCG TGGCCCTCGA GGGGCTCTCG
GTGACGGCGC CCCGGCAGGT GGGCAGCGCG GCCTTCGCCG ACCGGCTCGA GCCGCTCTAT
CCCCTGGCCG AGGCCATCGC GCGGGTGGCG GCAACTAGGC TCGGCCAGCC GCAGCCCCGG
CCCGCGCCCT TCTATCTGCG CGGCGCCGAT GCCGCGCCGG CCGCCGATCC CCCGCCGGTG
ATCCTGTGA
 
Protein sequence
MRPEPAILAF DTSAAHCAAA LLSGDRLLAL RTEPMEKGQA ERLMPLLEEV LAEGSLGWAD 
LDALAVGTGP GNFTGVRIAV AAARGLALAL GKPALGVSRF EALALGLPAP VAVLEDARRG
EVYLADGALP PRLVALEGLS VTAPRQVGSA AFADRLEPLY PLAEAIARVA ATRLGQPQPR
PAPFYLRGAD AAPAADPPPV IL