| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_0879 |
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| Symbol | |
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| ID | 4897722 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009049 |
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| Strand | + |
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| Start bp | 900878 |
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| End bp | 902212 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640111464 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_001042762 |
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| Protein GI | 126461648 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.696604 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGACA GACCGGCGGT GGCGCCGCCC GAGCTCACCC ATGCCCGCAT CCTGCGGATG
GCGCTGCCCA TCGTGATCTC GAACGCGACC GTGCCGCTGC TGGGCGCGGT CGACACAGGC
GTGGTGGGCC AGCTCGGGCA GGCGGCCCCC ATCGGGGCGG TGGGGCTCGG CGCCGTGGTG
CTGGCCACGC TCTACTGGAT CTTCTCGTTC CTGCGCATGG GCACCTCGGG GCTGGCCGCA
CAGGCCCATG GCGCGGGCGA CGAGGCCGAA CGGTCGGCCA TCCTGCTGCG CTCGCTTCTG
ATCGGGCTCG CGGCCGGGCT CTGCTTCATC CTGCTGCAGC TGCCGGTGAT CTGGGGCACC
TTCCGCGTGG CGCCCGCCTC GGCCGAAGTC GAGGCGCTGA CCCGAACCTA CCTCTCGATC
CGGATCTGGG GGGCGCCCGC GACCATCGGC CTCTATGCCG TCACCGGCTG GCTCGTGGCG
CTCGAGCGGA CGCGGGGCAT TCTGGTTCTC CAGCTCTGGA TGAACGGGCT GAACATCGGG
CTCGACCTGC TGTTCGTGCT GGGGCTGGGC TATGGCGTGG GCGGCGTGGC AGTGGCCACG
CTCGTCGCGG AATGGACGGG CCTCGCGCTC GGGCTCTGGC TCTGCCGCGA CGCCTTCGGC
CCGGTGCTGG CCGCGGCGCG CGCGCGCCTC GCCGATGCCG AGGCGATCCG GCGGATGCTG
GGCGTGAACC GGGACATCAT GATCCGTTCG GTGCTGCTTC AGGGCAGCTT CACCGCCTTC
GTCTTCCTCG GCGCGGGTTT CGGCGACGTG ACGCTCGCCG CGAACCAGGT GCTTCTGCAG
TTCCTCGAGG TCTCGGCCTA TGCGCTGGAC GGCTTCGCCT TCGCGGCCGA GGCGCTGGTC
GGGCAGGCGG TGGGCGCACG CTCGGTCGGC CGGGTGCGGC GCGCCTCGAT CATGCTCGGC
CAGTGGGGCG CGGGCGGGGC CGCGCTGATT GCGCTCGGGA TCGCGCTCTT CGGCCCGGCG
GTCATCGACC TGATCTCGAC CGCGCCCGAG GTGCGGGCCG AGGCCCGGGC CTATCTGCCC
TGGCTTGTCG CCGCGCCGCT GATCGGGGTG GCGAGCTGGA TCTTCGACGG CATCTTCATC
GGCGCCACCC GGACGCGCGA GATGATGCAG GCCATCATCG TTTCGGTCAC ACTCTACGGG
CTGGCGCTGC TGCTCTTCGT GCCACTCGTC GGCAACCATG GGCTCTGGGC CGCGCTCGCG
GTCCTGAACG CGACCCGCGG CGTCACCATG GCCCTTCTCT ATCCGCGGGT GGAGCGGTCG
GCGGCGCGCG TCTGA
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| Protein sequence | MSDRPAVAPP ELTHARILRM ALPIVISNAT VPLLGAVDTG VVGQLGQAAP IGAVGLGAVV
LATLYWIFSF LRMGTSGLAA QAHGAGDEAE RSAILLRSLL IGLAAGLCFI LLQLPVIWGT
FRVAPASAEV EALTRTYLSI RIWGAPATIG LYAVTGWLVA LERTRGILVL QLWMNGLNIG
LDLLFVLGLG YGVGGVAVAT LVAEWTGLAL GLWLCRDAFG PVLAAARARL ADAEAIRRML
GVNRDIMIRS VLLQGSFTAF VFLGAGFGDV TLAANQVLLQ FLEVSAYALD GFAFAAEALV
GQAVGARSVG RVRRASIMLG QWGAGGAALI ALGIALFGPA VIDLISTAPE VRAEARAYLP
WLVAAPLIGV ASWIFDGIFI GATRTREMMQ AIIVSVTLYG LALLLFVPLV GNHGLWAALA
VLNATRGVTM ALLYPRVERS AARV
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