| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_0871 |
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| Symbol | |
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| ID | 4897682 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009049 |
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| Strand | - |
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| Start bp | 893122 |
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| End bp | 895323 |
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| Gene Length | 2202 bp |
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| Protein Length | 733 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640111456 |
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| Product | 3-hydroxyacyl-CoA dehydrogenase, NAD-binding |
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| Protein accession | YP_001042754 |
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| Protein GI | 126461640 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.274544 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.255426 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGATT TCACCAGCCG GACCGACGCG GACGGGGTCT GCACCATCAC CTGGGACGTG
CCGGGTAAGT CGATGAACGT CATGTCGATG GCGGGATTTG CCGAGCTCGA CGGGCTGATC
GCCGCGGCGC TCGACGATCC GTCCGTCAAG GGCGTGATCC TCACCTCGGG CAAGAAGGAC
TTTGCCGCGG GGATGGATCT CAATGTCATC GCCCGCATGA AGGAGGAAGG CGGCGACGAT
CCGGCCCGGG CCGTGTTCGA GGGCGTGATG GAGATGCATG CCGTCCTGCG CCGGATCGAG
CGCGCGGGCA TGGATCCGAA GACGCTGAAG GGGGGCAAGC CCATCGTGGC GGCCCTGCCC
GGCACGGCCC TGGGCCTCGG GCTCGAGCTG CCGCTGGCCT GCCACCGCAT CATCGCGGCC
GACAATCCCA AGGCCAAGAT CGGCCTGCCC GAGATCATGG TGGGGATCTT CCCCGGCGGC
GGCGGCACGA CGCGGCTCGT CCGCAGGCTC GGCGCCATGA TGGCGGCGCC CCTCCTCCTC
GAGGGCAAGC TGAACGACCC CAAGGGCGCC AAGGCCATGG GTGTCGTCGA CGAGGTGGTG
CCGGCCGATC AGCTGCTCGC GCGGGCGAAG GAATGGGTGC TCGGCGCGAA GGACGCGGAT
CTGGTGAAGC CGTGGGATGC CAAGGGCTAC AAAATGCCCG GCGGCGCGCC CTACCATCCG
GCGGGCTTCA TGACCTTCGT CGGCGCCTCG GCCATGGTGA CGGGCAAGAC GATGGGCGTC
TATCCGGCGG CCAAGGGCCT GCTCGCGGCG GTCTACGAAG GCGCGCTCGT GCCCTTCGAC
ACGGCGCTGA AGATCGAGGC GCGCTGGTTC ACCCATGTGC TGATGAATCC CTCCTCGTCG
GCGATGATCC GGTCGCTCTT CATCAACAAG GAGGCGCTGG AGAAGGGCGC CGTCCGCCCT
GCCCTGCCCG ATCAGTCGGT CCGGAAGCTG GGCGTGATCG GGGCGGGCAT GATGGGCGCG
GGCATCGCCC ATGTCGCGGC CAATGCGGGC ATCGAGGTGG TGCTGATCGA CGCGACGCAG
GAGGCGGCCG ACCGCGGCAA GGCGCATTCG GAAGGTCTTC TCGACAAGGG GATGAAGCGG
GGCAAGGTCT CGGCCGAGAA GAAGGCCGAG GTGCTGGGCC GGATCGCCGC CACCACCGAC
TATGCGGCCC TTTCGGGCTG CGATCTGATC GTCGAGGCGG TGTTCGAGGA TCCCGCGGTG
AAGGCCGAGG TCACGCAGAA GGTCGAGGCC GCGGTCGGAC CCGACTGTAT CTTCGCAACC
AACACCTCGA CCCTGCCGAT CTCGGGGTTG GCCAAGGCGA GCCGCGATCC GGCGCAGTTC
ATCGGCATCC ACTTCTTCTC GCCGGTGGAC AAGATGATGC TGGTCGAGAT CATCCGCGGC
AAGGCCACCG GCGACCGCGC CGTGGCCAAG GCGCTCGATT TCGTGCGCCA GATCCGCAAG
ACGCCCATCG TGGTCCACGA TGCGCGCTTC TTCTACGCCA ACCGCTGCAT CATCCCCTAC
CTCAACGAGG GGATCCGCAT GGTGGCCGAG GGCGTGGCGC CCGCGCTGAT CGAGAATGCA
GCGAAGCTCG TGGGGATGCC GCTCGGCCCC CTGCAACTGG TGGACGAGAC CTCGATCGAC
CTCGGGGTGA AGATCGCCAA GGCCACGAAA GCCGCCCTGG GCGAGGCCTA TCCGGACGCG
GCTGTGGATG CGGTGATCTT CCCGCTGGCG GACGAGGGGC GGCTCGGCCG CAAGGCGGGC
GCGGGCTTCT ATGCCTACGA CGCCGCCGGC AAGCGCGACG GGCTCTGGCC CGGTCTCGCC
GACCGCTGGC CGCTGGCCGA GACGCAGCCC GAGCTTGCCG AGGTGCAGCA CCGGCTTCTC
TTCGCGCAGG TGCTCGAGGC GGTGCGCGCG CTCGAAGAGG GCGTGCTGAC CGACATCCGC
GAGGGCGACG TGGGCGCCAT TCTCGGCTGG GGCTTCGCGC CCTGGTCGGG CGGCCCGTTC
AGCTGGCTCG ACATGATCGG CGCGCCGCGT GCGGTGGAGA TCTGCGAGGG ACTGGCCGAA
CGTCACGGCA CCCGCTTCGC GCCGCCGAAG CTGCTGGTCG AGATGGCCGG CAAGGGCGAG
AGCTTCTACG CCCGCTTCGC ACCGCAGGCC CGCGCGGCCT GA
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| Protein sequence | MTDFTSRTDA DGVCTITWDV PGKSMNVMSM AGFAELDGLI AAALDDPSVK GVILTSGKKD
FAAGMDLNVI ARMKEEGGDD PARAVFEGVM EMHAVLRRIE RAGMDPKTLK GGKPIVAALP
GTALGLGLEL PLACHRIIAA DNPKAKIGLP EIMVGIFPGG GGTTRLVRRL GAMMAAPLLL
EGKLNDPKGA KAMGVVDEVV PADQLLARAK EWVLGAKDAD LVKPWDAKGY KMPGGAPYHP
AGFMTFVGAS AMVTGKTMGV YPAAKGLLAA VYEGALVPFD TALKIEARWF THVLMNPSSS
AMIRSLFINK EALEKGAVRP ALPDQSVRKL GVIGAGMMGA GIAHVAANAG IEVVLIDATQ
EAADRGKAHS EGLLDKGMKR GKVSAEKKAE VLGRIAATTD YAALSGCDLI VEAVFEDPAV
KAEVTQKVEA AVGPDCIFAT NTSTLPISGL AKASRDPAQF IGIHFFSPVD KMMLVEIIRG
KATGDRAVAK ALDFVRQIRK TPIVVHDARF FYANRCIIPY LNEGIRMVAE GVAPALIENA
AKLVGMPLGP LQLVDETSID LGVKIAKATK AALGEAYPDA AVDAVIFPLA DEGRLGRKAG
AGFYAYDAAG KRDGLWPGLA DRWPLAETQP ELAEVQHRLL FAQVLEAVRA LEEGVLTDIR
EGDVGAILGW GFAPWSGGPF SWLDMIGAPR AVEICEGLAE RHGTRFAPPK LLVEMAGKGE
SFYARFAPQA RAA
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