| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_0867 |
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| Symbol | |
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| ID | 4896924 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009049 |
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| Strand | + |
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| Start bp | 885882 |
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| End bp | 888011 |
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| Gene Length | 2130 bp |
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| Protein Length | 709 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640111452 |
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| Product | methylmalonyl-CoA mutase |
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| Protein accession | YP_001042750 |
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| Protein GI | 126461636 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1884] Methylmalonyl-CoA mutase, N-terminal domain/subunit
[COG2185] Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR00641] methylmalonyl-CoA mutase N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.134958 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGAAG ATCTCGATGC GTGGCGCAAG CTCGCCGAGA AGGAGCTGAA GGGCAAGAGC
CCCGACAGCC TGACCTGGAA CACGCTGGAG GGCATTCCGG TCAAGCCGCT CTATACCAGG
GCCGATCTTG CGGGGATGGA GCATCTCGAC GGGCTGCCCG GGGTCGCGCC CTTCACCCGC
GGCGTGCGCG CCACGATGTA TGCGGGCCGC CCCTGGACGA TCCGGCAATA TGCGGGCTTC
TCGACCGCCG AGGCCTCGAA CGCCTTCTAC CGCAAGGCGC TGGCCGCGGG GCAGCAGGGC
GTCTCGGTGG CCTTCGACCT TGCGACCCAC CGCGGCTACG ACAGCGACCA TCCGCGCGTG
GTGGGCGACG TGGGCAAGGC GGGCGTGGCC ATCGACTCGA TCGAGGACAT GAAGATCTTG
TTCGACGGCA TCCCGCTCGA GAAGATCTCG GTCTCGATGA CGATGAACGG CGCGGTGATC
CCGATCCTCG CCAATTTCAT CGTGACCGGC GAGGAGCAGG GCGTTCCGCG GGCCGCGCTG
TCGGGCACGA TCCAGAACGA CATCCTCAAG GAGTTCATGG TCCGCAACAC CTACATCTAT
CCGCCCGAGC CCTCGATGCG GATCATTGCG GACATCATCG AATATACCTC GAAGGAGATG
CCGAAGTTCA ACTCGATCTC GATCTCCGGC TACCATATGC AGGAGGCGGG GGCGAACCTC
GTGCAGGAGC TGGCCTATAC GCTGGCTGAC GGGCGCGAAT ATGTCCGCGC GGCGCTGGCG
CGCGGCATGA ATGTGGACGA TTTCGCCGGG CGCCTCAGCT TCTTCTTCGC CATCGGCATG
AACTTCTTCA TGGAAGCCGC GAAGCTCCGT GCGGCGCGGC TTCTGTGGCA CCGGATCATG
TCCGAATTCG CGCCGAAGAA GCCGGGCAGC CTGATGCTGC GCACCCACTG CCAGACCTCG
GGCGTGAGCC TGCAGGAGCA GGACCCCTAC AACAACGTCA TCCGCACCGC CTATGAGGCG
ATGTCGGCGG CGCTCGGCGG CACCCAGTCG CTGCATACGA ACGCGCTCGA CGAGGCCATC
GCGCTGCCCA CCGAATTCTC GGCCCGGATC GCGCGGAACA CCCAGATCAT CCTGCAGGAA
GAGACGGGCG TGACCAGGGT CGTCGATCCG CTCGCAGGCT CCTACTATGT CGAAAGCCTG
ACCGCCGAGC TTGCGGAAAA GGCCTGGGCG CTCATTGAGG AGGTCGAGGC CATGGGCGGC
ATGACCAAGG CCGTGGCCTC GGGGATGCCG AAGCTCCGGA TCGAGGAATC GGCCGCCCGC
CGGCAGGCCG CCATCGACCG TGGCGAGGAT GTGATCGTCG GCGTGAACAA GTATCGCCTC
GCCAAGGAGG ATCCGATCGA GATCCTCGAC ATCGATAACG TGGCCGTCCG CGACGCGCAG
ATCGCGCGGC TGAAGAAGAT GCGCGCCACC CGCGACGAGG CCGCCTGTCA GGCGGCGCTC
GACGAACTGA CCCGCCGCGC CGCCGAGGGC GGCAACCTGC TCGAAGCCGC GGTGGACGCC
TCGCGCGCCC GCGCCTCTGT CGGAGAGATC AGCATGGCCA TGGAGAAGGT GTTCGGCCGC
CACCGGGCGG AAGTGAAGAC GCTTTCGGGC GTCTATGGCG CGGCCTACGA GGGCGACGAC
GGCTTCGCGC AGATCCAGCG CGACGTCGAG AGCTTCGCCG AGGAAGAGGG CCGTCGGCCC
CGGATGCTGG TGGTGAAGAT GGGGCAGGAC GGCCACGACC GCGGCGCCAA GGTGATCGCC
ACCGCCTTCG CCGACATCGG CTTCGACGTC GATGTGGGCA CCCTGTTCCA GACGCCCGAG
GAGGCGGCGC AGGACGCCAT CGACAATGAC GTCCATGTGG TGGGCATCTC CTCGCTGGCC
GCGGGCCACA AGACCCTCGC GCCGAAGCTG ATCGAGGCGC TGAAGGAGAA GGGCGCGGGC
GAGATCCTCG TGATCTGCGG CGGCGTGATC CCGCAGCAGG ATTACGACTT CCTGCAGCAG
GCGGGGGTGA AGGCCATCTT CGGCCCCGGT ACCAACATCC CTTCGGCGGC CAAGCACATC
CTCGACCTGA TCCGCGAGGC CCGCAGCTGA
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| Protein sequence | MTEDLDAWRK LAEKELKGKS PDSLTWNTLE GIPVKPLYTR ADLAGMEHLD GLPGVAPFTR
GVRATMYAGR PWTIRQYAGF STAEASNAFY RKALAAGQQG VSVAFDLATH RGYDSDHPRV
VGDVGKAGVA IDSIEDMKIL FDGIPLEKIS VSMTMNGAVI PILANFIVTG EEQGVPRAAL
SGTIQNDILK EFMVRNTYIY PPEPSMRIIA DIIEYTSKEM PKFNSISISG YHMQEAGANL
VQELAYTLAD GREYVRAALA RGMNVDDFAG RLSFFFAIGM NFFMEAAKLR AARLLWHRIM
SEFAPKKPGS LMLRTHCQTS GVSLQEQDPY NNVIRTAYEA MSAALGGTQS LHTNALDEAI
ALPTEFSARI ARNTQIILQE ETGVTRVVDP LAGSYYVESL TAELAEKAWA LIEEVEAMGG
MTKAVASGMP KLRIEESAAR RQAAIDRGED VIVGVNKYRL AKEDPIEILD IDNVAVRDAQ
IARLKKMRAT RDEAACQAAL DELTRRAAEG GNLLEAAVDA SRARASVGEI SMAMEKVFGR
HRAEVKTLSG VYGAAYEGDD GFAQIQRDVE SFAEEEGRRP RMLVVKMGQD GHDRGAKVIA
TAFADIGFDV DVGTLFQTPE EAAQDAIDND VHVVGISSLA AGHKTLAPKL IEALKEKGAG
EILVICGGVI PQQDYDFLQQ AGVKAIFGPG TNIPSAAKHI LDLIREARS
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