| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_0779 |
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| Symbol | murD |
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| ID | 4896205 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009049 |
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| Strand | + |
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| Start bp | 787519 |
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| End bp | 788916 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640111363 |
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| Product | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase |
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| Protein accession | YP_001042662 |
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| Protein GI | 126461548 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase |
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| TIGRFAM ID | [TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.230521 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.687569 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTCCCG TCCGCGGCCT CGAGGGCCGA AAGGTGGCCG TGCTCGGCCT CGGCCGTTCC
GGTCTTGCCA CCGCCCGTGC GCTGGAAGCC GGAGGCGCCG AGCCGCTCCT GTGGGACGAC
AGCCCCGAAG CGCGCGCCAA GGCCGAGGGG CAGGGCTTCA CGGTGACGGA TCTCACCCGC
GAGCGGGCTT TCGAGGGCGT GGCGCTTCTG GTGACGAGCC CCGGCATCCC GCATCTCTAT
CCCGCGCCGA ACCCGGTGAT CGCGCGCGCC ATGGCGGCGG GCGTGCCGGT CGACAATGAC
ATCGGCCTCT TCTTCCGCAG CTTCGCCACC CGCGACTGGG ACGCGTTCGA CCAGATGCCG
CGCGTGGTCT GCGTCACCGG CTCGAACGGC AAGTCCACCA CCACGGCGCT CATCCATCAC
ATCCTGTCGG AGGCCGGAAG GCCCACGCAG ATGGCGGGCA ACATCGGCCG CGGCGTGCTC
GATCTCGACC CCGCCCGCGA TGGCGAGGTG GTGGTGCTGG AGCTCTCCTC CTACCAGACC
GATCTCGCCC GCGCGCTGAC GCCCGACGTG GCGGTCTTCA CCAACCTCTC GCCCGACCAT
CTCGACCGGC ACGGCGGCAT GGGCGGCTAT TTCGCGGCCA AGCGCCGGCT CTTCGCCGAA
GGCGGCCCGG ACCGCGCCGT GATCGGGGTG GACGAGCCCG AGGGGCTCTA TCTCGCGGGC
CAGCTGTCGG TTGCGCCCGA GGACGACCGG GTGATCCGTA TCTCGGCGGG CCAGAAGCTC
GAGCGGTTCG GCTGGTCGGT CTTCGCGCGC AAGGGCTTCC TCGCGGAATG GCGCAAGGGC
CGGCAGATGG CCTCGATCGA CCTGCGCGCC ATGCCGGGCC TGCCCGGGGC GCACAACCAC
CAGAATGCCT GCGCCGCCTA TGCGGCCTGC CGGACGCTGG GCCTCGCCCC GCGCCAGATC
GAGGCGGCGC TGGCCTCCTT CGCGGGCCTG CCGCACCGGA GCCAGACGGT GGGCGAGAAG
GGCGGCGTGC GCTTCGTGAA CGATTCGAAG GCCACCAACG TGGACAGCGC GGCCAAGGCG
CTGCAGGCCT TCCCGAAGAT CCGCTGGATC GCGGGCGGGC TCGGCAAGGA CGGCGGGATC
GCGGCGCTCC AGCCGCATCT GGGCTCGGTG GTGAAGGCCT ATCTCATCGG CCATTCGGCG
CGCGACTTCG CGCTGCAGAT CGGCGCGACC GACCACGAGA TCTGCGAGAC GATGGAGCGC
GCGGTGGCCC GGGCGGCCGA GGAGGCGCAG CCGGGCGAGG TCGTGCTGCT TGCGCCCGCG
GCGGCGAGCT TCGACCAGTA TCCGAACTTC GAAAAGCGCG GCGAGGACTT CATGGAGAAG
GTGAAGGCCC TGCTGTAA
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| Protein sequence | MIPVRGLEGR KVAVLGLGRS GLATARALEA GGAEPLLWDD SPEARAKAEG QGFTVTDLTR
ERAFEGVALL VTSPGIPHLY PAPNPVIARA MAAGVPVDND IGLFFRSFAT RDWDAFDQMP
RVVCVTGSNG KSTTTALIHH ILSEAGRPTQ MAGNIGRGVL DLDPARDGEV VVLELSSYQT
DLARALTPDV AVFTNLSPDH LDRHGGMGGY FAAKRRLFAE GGPDRAVIGV DEPEGLYLAG
QLSVAPEDDR VIRISAGQKL ERFGWSVFAR KGFLAEWRKG RQMASIDLRA MPGLPGAHNH
QNACAAYAAC RTLGLAPRQI EAALASFAGL PHRSQTVGEK GGVRFVNDSK ATNVDSAAKA
LQAFPKIRWI AGGLGKDGGI AALQPHLGSV VKAYLIGHSA RDFALQIGAT DHEICETMER
AVARAAEEAQ PGEVVLLAPA AASFDQYPNF EKRGEDFMEK VKALL
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