Gene Rsph17029_0643 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_0643 
Symbol 
ID4897293 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009049 
Strand
Start bp657986 
End bp658834 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content68% 
IMG OID640111226 
Productpeptidase S14, ClpP 
Protein accessionYP_001042528 
Protein GI126461414 
COG category[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0740] Protease subunit of ATP-dependent Clp proteases 
TIGRFAM ID[TIGR00493] ATP-dependent Clp protease, proteolytic subunit ClpP 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATCC GCAAACTTCC CGCCGCGCCT TCTGCCGGTC TCCTCCTGCC CCTGGTCCGG 
TCCGAGATCT CGGGTCGGGC GGAGCAGCGG TGGAACGAGG GCGTTCGCGC TGCGGCCGAT
GAGGAAAGCT CCATCTCGAT CCTGGGGGTG ATCGGGTCCG ACTTCTGGGA CGAGGGCGTG
ACGGCGAAGC GGATCTCGGC CGCGCTGCGC GCCATCGGGC CGCGGGACGT GGTGGTGAAC
ATCAATTCCC CGGGCGGAGA CGTGTTCGAG GGGCTGGCGA TCTACTCGCT GCTGCGGGAG
CACAAGGGCC ACGTCACGGT CAAGGTGCTC GGGCTCGCGG CCTCGGCCGC GTCGGTGATC
GCGATGGCCG CGGATGATCT GCTTATCGCT CGAGCGGGCT TCCTGATGAT CCACAACACT
TGGGTGGGTG CTGCTGGTGA TCGCCACGCG CTGCGGGAGG CGGCCGACCT GCTAGAGCCG
TTCGACGCTG CGCTTGCGGA TATCTATGCC GCCCGATCCG GTGTCTCGGC GGCCGAGATC
TCAGCGATGC TCGACAAGGA GACGTGGATG GGCGGCTCGG AGGCGATCGC GGCCGGGTTT
GCCGATGGGC TTCTGTCGTC CGATGCGGTG GCCGAGGACG AACAGCCGCA GGCGTCGGCG
CTGCGGCGCC TCGATGCCGC TCTCGCAAAA TCGGGGATGC CGCGCTCGGA GCGTCGTCGT
CTCTGCAATC AGCTTTTCGC CAAGCCGGGC GCTGGCGATG AGGGCATGCC GCGCGCTGCC
GAAACGGAGG CCGATGGCCT CTCCGCTCTG CGGGTGCTTG CCGCCCAGAT GAGCCTGTTC
CGGGCGTGA
 
Protein sequence
MTIRKLPAAP SAGLLLPLVR SEISGRAEQR WNEGVRAAAD EESSISILGV IGSDFWDEGV 
TAKRISAALR AIGPRDVVVN INSPGGDVFE GLAIYSLLRE HKGHVTVKVL GLAASAASVI
AMAADDLLIA RAGFLMIHNT WVGAAGDRHA LREAADLLEP FDAALADIYA ARSGVSAAEI
SAMLDKETWM GGSEAIAAGF ADGLLSSDAV AEDEQPQASA LRRLDAALAK SGMPRSERRR
LCNQLFAKPG AGDEGMPRAA ETEADGLSAL RVLAAQMSLF RA