Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_0520 |
Symbol | |
ID | 4896224 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009049 |
Strand | - |
Start bp | 545827 |
End bp | 546474 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640111104 |
Product | pyrimidine 5'-nucleotidase |
Protein accession | YP_001042408 |
Protein GI | 126461294 |
COG category | [R] General function prediction only |
COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED [TIGR01993] pyrimidine 5'-nucleotidase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTGGCCG ATCGTTTCTC ACATGTCCGG GGCTGGGTCT TCGACCTCGA CAACACGCTC TATCCCCCGT CCGCGCGCCT CTTCGACCAG ATCGAGCGGC GGATGACGGA CTGGGTGATG ACCGAACTCC GCGTCGTGCG GGAAGAGGCC GACCGGCTCC GGCGGCACTA CTGGTCCACC TACGGCACCA CGCTGGCAGG GCTGATGGCC GAGCACGGGG TCGATCCCGC GCCCTACCTG AGCCATGTCC ACGACATCTC GCTCGACCAT CTCGAGCGCG ACATGATCCT CGCCGCGCGC ATCCGGGCGC TGCCGGGGCG CAAGATCGTC TATACCAACG GCTGCGCGCC CTATGCCGAG CGCGTGCTCG AGGCGCGCGG CCTCGCGAAC CTCTTCGATG CGGTCTATGG CGTCGAACAT GCGGGCTTCC GCCCGAAGCC CGAACGCGCG GCCTTCGAGA CCGTCTTCGC CGCCGACCGG CTGGCGCCCG GGACCGCCGC CATGTTCGAG GACGATTCGC GCAATCTCCT CGCGCCGCAC GAGATGGGGA TGCGCACCGT CCATGTGGCG CCCGAGGCGC TTCCTGCGCC GCACATCCAC CACCACACGC TCGATCTGTC GGAGTTCCTG GCCCTTCTGC AGCCCTGA
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Protein sequence | MVADRFSHVR GWVFDLDNTL YPPSARLFDQ IERRMTDWVM TELRVVREEA DRLRRHYWST YGTTLAGLMA EHGVDPAPYL SHVHDISLDH LERDMILAAR IRALPGRKIV YTNGCAPYAE RVLEARGLAN LFDAVYGVEH AGFRPKPERA AFETVFAADR LAPGTAAMFE DDSRNLLAPH EMGMRTVHVA PEALPAPHIH HHTLDLSEFL ALLQP
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