Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_0376 |
Symbol | rplF |
ID | 4895918 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009049 |
Strand | + |
Start bp | 392807 |
End bp | 393340 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640110960 |
Product | 50S ribosomal protein L6 |
Protein accession | YP_001042264 |
Protein GI | 126461150 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0097] Ribosomal protein L6P/L9E |
TIGRFAM ID | [TIGR03654] ribosomal protein L6, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.667963 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTCGTA TCGGCAAGAA ACCCGTACCG CTGCCGAAAG GCGTGACGGC CTCGATCTCG GGCCAGTCGA TCGAAGTGAA GGGCCCGAAA GGCACCCGCA GCTTCTCGGC GACCGACGAC GTGACCCTCG CGCTGGACGA AGGTTCGGTG AAGGTGACCC CGCGCGGCAC CTCGAAGCGT GCCCGTCAGC AATGGGGCAT GGTGCGGTCG CAGGTGGAAA ACCTCGTGAC CGGCGTCACC AGCGGCTTCA AGAAGGAGCT GGAGATCTCG GGCGTGGGTT ACCGCGCGCA GATGGCCGGC AACGTGCTGA AGCTCTCGCT CGGCTATTCG CACGACGTCA ACTTCGAGGT TCCGGCGGGC GTCACCGTCA CCACCCCGAA GCAGACCGAG ATCACGGTCG AAGGCATTGA CCAGCAGCTG GTCGGCCAGG TGGCGGCGAA CATCCGCGAG TGGCGGCGTC CCGAGCCCTA CAAGGGCAAG GGCATCCGCT ACAAGGACGA GTTCATCTTC CGCAAGGAAG GCAAGAAGAA GTAA
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Protein sequence | MSRIGKKPVP LPKGVTASIS GQSIEVKGPK GTRSFSATDD VTLALDEGSV KVTPRGTSKR ARQQWGMVRS QVENLVTGVT SGFKKELEIS GVGYRAQMAG NVLKLSLGYS HDVNFEVPAG VTVTTPKQTE ITVEGIDQQL VGQVAANIRE WRRPEPYKGK GIRYKDEFIF RKEGKKK
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