Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_0327 |
Symbol | |
ID | 4895756 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009049 |
Strand | - |
Start bp | 341785 |
End bp | 342600 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640110909 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001042215 |
Protein GI | 126461101 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0407842 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.674714 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAGCG TTCTGATCAC GGGCTGCTCG TCGGGCATCG GGCTCGACGC GGCGCGGGGG CTTGCGGCCC GCGGCTGGCG GGTCTTCGCC ACCTGCCGGC AGGAAGCCGA CTGCGACCGC CTCCGCAGCG AGGGGCTCGA GAGCTTCCGG CTCGATTACG ACGATCCCGA AAGCCTCGCC GCCGCCGTCG CGGAGACCAC GCGCCGCACC GGCGGCACGC TCGACGCGCT CTACAACAAC GGCGCCTTCG CCTGCCCGGG CGCGGTCGAG GATCTGCCGC GCGAGGCGCT GCGGGCCGTG CTCGAGACCA ATGTCGTGGG CGTCCACGAC CTGACGCGGC GGGTCATCCC GATCATGCGC CGTCAGGGGC ACGGGCGGAT CGTCAATTGC TCCTCGGTGC TGGGCTTCGT GGCCTATCCC TGGCGCGGCG CCTATGTCGC CTCGAAATTC GCGATGGAAG GGCTGACCGA CGTGCTGCGG ATCGAGATGG CCGATACGCC GATCCGGGTG ATCCTGCTGG AGCCGGGCCC CATCGCCTCG CGGATCCGCG AGAATTCCAT CCCGCATTTC GAACGCTGGA TCGACTGGAG AGCCTCGGCC CGCGCCGACC AGTATCGCAC GCTTCTGGGC CGGCTCTACG AGGGCGGCGA GGATCGCTGG CAGCTGCCCC CATCCGCCGT CACGGAAAGA CTGGTGCAGG CGCTGGAAAG CCCCCGCCCC CGCGCGCGCT ACCGGATCAC CGTGCCGAGC CGCACCGCCT GGGTGCTGCG GCGGCTCCTG CCGACCGCGG CGCTCGACCG GGTGCTCGGC CGCTGA
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Protein sequence | MKSVLITGCS SGIGLDAARG LAARGWRVFA TCRQEADCDR LRSEGLESFR LDYDDPESLA AAVAETTRRT GGTLDALYNN GAFACPGAVE DLPREALRAV LETNVVGVHD LTRRVIPIMR RQGHGRIVNC SSVLGFVAYP WRGAYVASKF AMEGLTDVLR IEMADTPIRV ILLEPGPIAS RIRENSIPHF ERWIDWRASA RADQYRTLLG RLYEGGEDRW QLPPSAVTER LVQALESPRP RARYRITVPS RTAWVLRRLL PTAALDRVLG R
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