Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17029_0303 |
Symbol | |
ID | 4896333 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17029 |
Kingdom | Bacteria |
Replicon accession | NC_009049 |
Strand | + |
Start bp | 319464 |
End bp | 321581 |
Gene Length | 2118 bp |
Protein Length | 705 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640110885 |
Product | (p)ppGpp synthetase I, SpoT/RelA |
Protein accession | YP_001042191 |
Protein GI | 126461077 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.480433 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGACG TCGAAGACCT GATCGCCCTG GTCCGCAACT ACAACCCGCG CACCAATGCC GACCTGATCC GCCGGGCCTA TGCCTACGGT CGGCAGATGC ACGAGGGCCA GTTCCGCCAC TCGGGCGAGC CCTACTTCAC CCATCCCGTC GCCGTCGCCG CCATCCTGAC CGAGCAGCGG CTCGATGACG CGACCATCGT GACGGCGCTT CTGCACGACA CGATCGAGGA CACGAAGTCC ACCTACACCG AAGTCGCCCG TCTCTTCGGC GAGGATATCG CCGAGCTGGT GAACGGGGTC ACGAAGCTCA CCAACCTCGA GCTCTCCTCG GCGCAATCCA AGCAGGCCGA GAACTTCCGC AAGCTGTTCA TGGCGATGTC GAAGGATCTG CGGGTGATCC TCGTGAAGCT CGCCGACCGC CTGCACAATA TGCGCACCAT CAAGTCGATG CGCCCCGAGA AGCAGGCCCA GAAGGCGCGC GAGACGATGG AGATCTTCGC GCCGCTCGCG GGCCGCATGG GGATGCAGTG GATGCGCGAG GAGCTGGAAG ACCTCGCCTT CCGCGTCCTG AACCCCGAGG CGCGCAACTC GATCATCCGC CGCTTCATCA CGCTCCAGCG CGAGACGGGC GATGTGGTCC ACAAGATCAC CGCCGACATC CGGCTGGAGC TGGAAAAGGC GCAGATCGAG GCCGACGTCT ACGGACGGGC CAAGAAGCCC TATTCGATCT GGCGCAAGAT GCAGGAGAAG GATCTGGCCT TCTCGCGTCT CTCCGACATC TACGGCTTCC GCGTCATCTG CAAGGATGTG GCCGACTGCT ACCGCATCCT CGGCGTGATC CACCAGCGCT GGCGCGCGGT GCCGGGACGG TTCAAGGACT ACATCAGCCA GCCCAAGTCG AACGGCTACC GCTCGATCCA CACCACGGTC TCGGGGCGCG ATGGCAAGCG GGTCGAGGTG CAGATCCGCA CCCGCCAGAT GCACGAGGTG GCCGAGGCCG GCGTCGCCGC GCACTGGAGC TACCGCGAGG GCGTGCGCGT CCACAACCCG TTCGCCGTCG ATCCCGCCCG CTGGATCGCG AGCCTGACCG AGCGGCTGGA CGAGGACGAC CATGACGAGT TCATGGAGAA CGTGAAGCTC GAGATGTACA CCGACCAGGT GTTCTGCTTC ACGCCGAAGG GCGACGTGAT CCAGCTGCCG CGCGGGGCGA CGCCGCTCGA TTTCGCCTAT GCGATCCACA CCCGCATCGG CCATTCCACC GTCTCGGCCA AGGTCGACGG CATCCGCGTG CCGCTCTGGA CCCGGCTGAA GAACGGCCAG TCGGTCGAGA TCATCACCGC CGAGGGGCAG CGCCCGCAGG CCTCCTGGAT CGACATCGTG ACGACGGGGC GGGCCAAGGC CGCGATCCGG CGCAGCCTGC GCGAGGAGGA CCGGGGCCGC TTCGTGAAGC TCGGGCAGGA ACTCGTGCGC GCGGCCTTCG ACCATGTGGG GCGCAAGGCC ACCGACAAGG CGCTTAGGAC GGCGGCGAAG ATGCTGGGCC TCTCGGACGA GACCGAGCTT CTGGCGCAGC TGGGGTCTGC CGAGCTGACC GCGCGCAAGG TGGTCGAGAC CCTTTATCCC GAACTCGTGC GCTCGAGCGG GCCCGAGGTC GACATGCAGC GCCCCGTGGT CGGCCTGTCC GACGATCAGC AGTTCCGCCG CGCCAAATGC TGCCAGCCGG TGCCGGGCGA GCGGATCGTG GGCATCACCT ATCGCGGGCA GGGCGTGGTC ATCCATGCCA TCGACTGCCC GGCCCTCGAG GAGTTCGAGG AACAGCCCTC GCGCTGGATC GACCTTCACT GGCACGCCGG GCGCCATGCG CCTGTCCACA CCGTGACGCT CGATCTCACG ATTTCGAACG ATGCGGGCGT TCTGGGACGG ATCTGCACCT TGATCGGAGA GCAGAAGGCC AATATCTCGG ACCTGAGGTT CACCGATCGC AAGCCCGACT TCTATCGCCT TCTGGTCGAT GTGGATCTGT GCGATGTCGA ACATCTGCAC ACGCTGATGA CCGCCCTCGA AGCCGAGACG GATGTGGCGC AGATATCCCG GCACCGCGAT CTGAGCAGGA AACCCTGA
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Protein sequence | MIDVEDLIAL VRNYNPRTNA DLIRRAYAYG RQMHEGQFRH SGEPYFTHPV AVAAILTEQR LDDATIVTAL LHDTIEDTKS TYTEVARLFG EDIAELVNGV TKLTNLELSS AQSKQAENFR KLFMAMSKDL RVILVKLADR LHNMRTIKSM RPEKQAQKAR ETMEIFAPLA GRMGMQWMRE ELEDLAFRVL NPEARNSIIR RFITLQRETG DVVHKITADI RLELEKAQIE ADVYGRAKKP YSIWRKMQEK DLAFSRLSDI YGFRVICKDV ADCYRILGVI HQRWRAVPGR FKDYISQPKS NGYRSIHTTV SGRDGKRVEV QIRTRQMHEV AEAGVAAHWS YREGVRVHNP FAVDPARWIA SLTERLDEDD HDEFMENVKL EMYTDQVFCF TPKGDVIQLP RGATPLDFAY AIHTRIGHST VSAKVDGIRV PLWTRLKNGQ SVEIITAEGQ RPQASWIDIV TTGRAKAAIR RSLREEDRGR FVKLGQELVR AAFDHVGRKA TDKALRTAAK MLGLSDETEL LAQLGSAELT ARKVVETLYP ELVRSSGPEV DMQRPVVGLS DDQQFRRAKC CQPVPGERIV GITYRGQGVV IHAIDCPALE EFEEQPSRWI DLHWHAGRHA PVHTVTLDLT ISNDAGVLGR ICTLIGEQKA NISDLRFTDR KPDFYRLLVD VDLCDVEHLH TLMTALEAET DVAQISRHRD LSRKP
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