| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_0254 |
|---|
| Symbol | |
|---|
| ID | 4897994 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17029 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009049 |
|---|
| Strand | - |
|---|
| Start bp | 276278 |
|---|
| End bp | 277927 |
|---|
| Gene Length | 1650 bp |
|---|
| Protein Length | 549 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640110837 |
|---|
| Product | AMP-dependent synthetase and ligase |
|---|
| Protein accession | YP_001042145 |
|---|
| Protein GI | 126461031 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGTTGGC TGGCGGACGA GCGCGGGCTG GAAAAATGCG CGGCGAATTA CGCGGCGCTT
ACGCCCCTGT CGCACCTCAA GCGCGCCGCG GAGGTCCATA CCGACCGCAC CGCTCTCGTG
AATGGCTCGA TCCGGCTGAC CTATGGCGAA TATCATGCCC GCGTCAGCCG CCTCGCCTCG
GCGCTGGCGG GCATGGGCAT CCAGCCGGGC GACGTGGTGG CGACGCTCCT GCCCAATATC
GCCGCCCATG CCGAGGCTCA TTTCGGGGTG CCCGCCTGCG GCGCGATCCT GAACGCGATC
AACACGCGCC TCGATCTGGA TACCGTGTCC TATATCCTCG AGCATGGCGG GGCGAAGCTC
CTGCTCTGCG ATACGGCCTT CCTGAAGCTC GCGAAGGATG CCTGCGCCCG GCTGGAAGGA
AAGGCGCCGA TCCTCGTCGA GGTCTGCGAC CGCGAGGCGG GCTTCTCTCC TTCGGGCGAG
GTGCTGGAAT ATGAGGACCT CATGGACCGC GGCAACCCGT GGGCGCCCTG GGTGATGCCC
GAGGACGAGT GGGAGAGCAT CGCGCTCAAC TATACCTCCG GCACGACGGG GCGGCCGAAG
GGCGTGGTCT ACCACCACCG CGGCGCCTAT CTCTCGACCT ACGGCAATGC CATCGCCTGG
CGGATGCAGC TCTACCCGGT CTACCTGACC ATCGTGCCGC TCTTTCACTG CAACGGCTGG
TGTCACACCT GGATGGTGCC GATGCTGGGC GGTACCGTCG TCTGCTGCCG CGACATCACC
GCGAAGGCGA TCTATGCGGC CATCGCCGAC GAGGGCGTGA CCCATTTCGG CGGCGCGCCC
ATCGTGCTCA ATACGCTCAT CAATGCAGCC CCCGAAGACC GGCGCAGCTT CGATCAGGTG
GTGGAGGTCT TCACCGCGGG CGCCCCGCCT CCGGCAGCGA CGCTGGCGGC CATCGAACCG
CTCGGCTTCA ACGTGACCCA GGTCTACGGG CTGACCGAGG TCTATGGCCC GGCCACCGAA
TGCATCTGGA AGCCCGAGTG GGACGAGACG GCTGGCGAGG AGCGTGCGGC GCTGAAGGCG
CGCACCGGCG TCGCCATGGC GACCCTCGAA GGGGCCGAGG TGCACGACAC CCACGGACAG
CCGATCCCGC GCGACACCGT CCATCTGGGC GAGATCGCGA TGCGCGGCAA CATGGTGATG
AAGGGCTATT ACAAGAACCC CGAGGCCACG GCCGAGGCCT TCCGCGACGG CTGGTTCCGC
TCGGGCGACA TCGCCTTCCA GCATCCCGAC GGCTATATTA AGATCACCGA CCGCGCAAAG
GACATCATCA TCTCGGGCGG CGAGAACGTC TCGTCCGTCG AGGTGGAAGG CGTGATCGCC
CACCATCCGG CCGTCAGCCT CTGCGCCGTT GTAGCCAAGC CCGACGAGCG CTGGGGCGAG
GTGCCCTGCG CCTTCGTCGA GCTGAAACGC GGCCGGCAAG CCACCGAGGA GGAGATCATC
GCCTTCGCCC GCGAGCGTCT GGCGGGCTTC AAGACGCCCA AGCAGGTCAT CTTCTGCGAA
TTGCCCAAGA CCTCGACCGG CAAGATCCAG AAGTTCGAAC TGCGCGCCGT GGCCAAGCTC
GCCGTGACGG AGACGGAAGA CGCCCGTTGA
|
|---|
| Protein sequence | MGWLADERGL EKCAANYAAL TPLSHLKRAA EVHTDRTALV NGSIRLTYGE YHARVSRLAS
ALAGMGIQPG DVVATLLPNI AAHAEAHFGV PACGAILNAI NTRLDLDTVS YILEHGGAKL
LLCDTAFLKL AKDACARLEG KAPILVEVCD REAGFSPSGE VLEYEDLMDR GNPWAPWVMP
EDEWESIALN YTSGTTGRPK GVVYHHRGAY LSTYGNAIAW RMQLYPVYLT IVPLFHCNGW
CHTWMVPMLG GTVVCCRDIT AKAIYAAIAD EGVTHFGGAP IVLNTLINAA PEDRRSFDQV
VEVFTAGAPP PAATLAAIEP LGFNVTQVYG LTEVYGPATE CIWKPEWDET AGEERAALKA
RTGVAMATLE GAEVHDTHGQ PIPRDTVHLG EIAMRGNMVM KGYYKNPEAT AEAFRDGWFR
SGDIAFQHPD GYIKITDRAK DIIISGGENV SSVEVEGVIA HHPAVSLCAV VAKPDERWGE
VPCAFVELKR GRQATEEEII AFARERLAGF KTPKQVIFCE LPKTSTGKIQ KFELRAVAKL
AVTETEDAR
|
|---|
| |