| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_0178 |
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| Symbol | |
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| ID | 4896369 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009049 |
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| Strand | + |
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| Start bp | 194649 |
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| End bp | 197969 |
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| Gene Length | 3321 bp |
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| Protein Length | 1106 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 640110761 |
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| Product | UvrD-like DNA helicase, C terminal |
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| Protein accession | YP_001042069 |
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| Protein GI | 126460955 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1074] ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) |
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| TIGRFAM ID | [TIGR02784] double-strand break repair helicase AddA, alphaproteobacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.124424 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGGCC AGAGGGACGA GGCCTCCGAA CGTCAGGTGC AGGCCGCCGA TCCGCGCGCC
TCGACCTGGC TTTCCGCCAA TGCGGGCTCG GGCAAGACGC GGGTGCTGAC CGACCGGGTG
GCGCGGCTGC TGCTCGACGG GGTCGAGCCG CAGCGCATCC TCTGCCTGAC CTATACCAAG
GCCGCCGCCT CCGAGATGCA GAACCGGCTG TTCCGGCGGC TGGGCGAATG GGCGATGCTC
GACGATGCCG AGTTGCGTCA CGCGCTCGAT ACGCTGGGCG TGGCCGCCGT GGGGCACGAG
GTGCTGGCGC AGGCCCGCAG GCTATTCGCC CGCGCCATCG AGACGCCGGG CGGGCTGCGG
ATCCAGACGA TCCACTCCTT CTGCGCGACG CTCCTGCGCC GCTTTCCGCT GGAGGCCGGG
GTCTCGCCGC AGTTCACCGA GCTCGACGAC CGCGCCGCAC GCCTCCTGCG CGAGGAGATC
GTCGAGGAGT TGGCCGACCG GATCGCCCCC GGCGTGGTGG CCGATCTGGC ACGCGCCTAT
ACGGGGGAGG ATTTCGGCGC GCTGGCCGAG GAGGTGGCGC GCAATGCCGC GGGCCTCCTG
CCGCCGCTCG ACGCCCCGGC CTGCCGGGCG CTCTACGGGG TGGAGGGCGA CGAGGCGGCG
CTTCTGGCGC AGGTCTTCCT CGGCGGCGAG GCGGAGTGGA TGCCCGCGCT GATCGCAGCC
CTCGAGGCGG GATCGGCGAA CGACCAGAAG GCTGCGGCGA AGCTGCGGCT TCTGTCCTTC
GCGTCGCCGA CGACCGCCAC ATTGGCCGGG CTCGAGGGGG TGCTCCTGAC CGGGGCCTCG
GCCAAGGAGC CCTATACCGC CAAGCTCGGC AGCTTCCCGA CCAAGGCCAC GCGCGGGGCG
CTGGGCCCGC TCGCTGACCG GCTCGATGCG CTGATGCGCC GGGTCGAGGC CGCGCGCCCC
GTTCGCTGCT GCCTGCTCGC CGCCGAGCGG GCGCGGCTGA TCCATGCCTT CGCGGGCGTG
TTCCTGCCGC TCTATCAGGC GCGCAAGGCC GCCCGCGGCT GGCTCGATTT CGACGATCTG
ATTCAGCGCG CCAAGGGCCT GCTGACCGAT CCGTCGGTGG CGCAATGGGT GCTCTTCCGG
CTCGACGGCG GGATCGACCA TATCCTCGTC GACGAAGCGC AGGACACGAG CCCCGACCAG
TGGAAGGTGA TCGAGCTGCT GGCGCAGGAA TTCACCTCGG GGCGCGGCGC GCGCGAGGTG
GAGCGGACGA TCTTTGTCGT GGGAGACAAG AAACAGTCGA TCTACTCGTT CCAGGGCGCC
GATGTGGCGG CCTTCGATCG GATGCGGGCC GAGTTCGGAG AGCGTCTCGC GGGCGCCCGG
CGGCGGCTCG AGGAGCTGGA TCTGCTGCAT TCCTTCCGCT CCTCGCCCGC GATCCTGCGG
CTGGTGGATC TCACCTTCGA CGAGCCCCGC CGGCAGGCGC TGGGCGGCGA GGTCCGCCAC
ATCGCCTTCC GCGGCGACAT GCCGGGGCGG GCCGAGCTCT GGCCGCTGGT CGAGGCCGCC
GAGGAGCCCG AGCCCGAGAA CTGGTTCGAT CCGGTGGACC TCGTCTCGGA CGAGCATCAT
GCGGCGCGGC TCGCACGGCA GGTGGCCACC CGCATCCGCG CCATGATCGA GGCGGGGGTG
CAGATCCCGC AGCCCGGCGG CTTCCGCCCC GTCGCGGCGG GCGATTTCCT GATCCTCGTC
CAGCGCCGCT CGGACATCTT CGGCGAGATC ATCCGGGCTT GCAAGGAAGC CCGCCTGCCC
ATCGCCGGGG CCGACCGGCT GAAGCTCGGG GCCGAGCTTG CGGTGCGCGA CCTGTCGGCG
CTGCTCGCCT TCCTCGCCAC GCCCGAGGAC GATCTGTCGC TCGCCGCCGT CCTGCGCTCG
CCGCTCTTCG GCTGGAGCGA GGGCGAGCTC TTCGATCTGG CGCACGGGCG GGAGGGCTAT
CTCTGGCGCC GGCTCTACGA CCGCGAGGCG GCCCATCCCG CGACGGTGGC GATCCTGCGG
GACCTGCGCG ATCAGGCGGA TTTCCTGCGC CCCTTCGACC TGATCGAGCG CGCGCTGACC
CGCCACGACC GCCGCCGCCG GCTGCTGGCC CGGCTGGGCG AGGAGGCCGA GGACGGGATC
GACGAACTGC TCAGTCAGGC GCTGGCCTAC GAGCGGACCG ACGTGCCGAG CCTCACCGGC
TTCCTGACAT GGCTTCAGAC CGACGAAGTC GAGGTAAAGC GGCAGATGGA GGCCGCGGGC
GGGCGCATCC GGGTGATGAC GGTGCATGGC TCGAAAGGGC TCGAGGCGCC CATCGTGATC
CTGCCCGACA CGGCCGACCG CAAGCCGCGC GAGCGCGACG AGCTGTTCAC GCTGGAGGGG
GGCGCGCGGG TCTGGAAGAC GCCCGCCGCC GAGAGCCCGC CGCAGATTGC CGCCGCCCGC
GAGGCGCGGC GCGCGCGCGA TGCGGCCGAG AACCTGCGGC TGCTCTATGT CGCCATGACG
CGGGCCCAGT GCTGGCTGAT CGCGGCGGCG GCCGGCAAGC TCGAGACGGG GGGCGCCTGG
CACGACCTGA TCCGGCAGGG GATGGAGGCC GCGGGCGCCG AGCGGCGTGA CGACGGGGCG
CTGGTGCTCG ACGAAGGCCT CTGGCCCCCG GCCGCGCCGC AGGCCTCGGC AGCGGCCGCC
GCCGCGCGGC CCGTCCTGCC CGCCTGGGCG CTGGCGCCTG CGGCCGAGCC CCCGGCCGCG
CCCGAGGTGC TGTCGCCCTC GGCCCTCGGC GGGGCCAAGG CGCTGCCCGG CGACGCGATG
CCCACCGAGG AGGCGCTGGC GCATGGCTCG GCCGTCCACC GGCTGCTCGA GCATCTGCCG
CTCCATCCGC CCGAGGGGTG GGAGGCGGCG GCGCGGGGGC TCCTGCCCGA TCTTCCCGAT
GTGGCCCCCG TTCTCGCGGA GGCCCGGGCG GTGCTCTCGG CCGAACATCT GGCCGAGGCG
CTGGTGCCGC ATGCGCTGCT CGAGGTGGCG GTGACGGCCA AGGTGGCGGG GCGGCGGCTT
TCCGGCACCA TCGACCGGCT GGTGGTGGAG CCCGACCGGG TGCTGGCGGT CGATTACAAG
ACGAACCGTG TGGTCCCGGA CCGTCCCGAA GAGGTGCCCG AGGGCATCCT GCGGCAGATG
GGCGCCTATG CCGAGGCGCT GGCGCAGATC TACCCCGGAC GGACGATCGA GACGGCGATC
CTCTGGACGC AGGCGGCCCG CCTGATGCGG CTGCCCCGCG ATATCGTGAG GTCGGCCATG
GTCCGGGCCA CGACAACTTG A
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| Protein sequence | MSGQRDEASE RQVQAADPRA STWLSANAGS GKTRVLTDRV ARLLLDGVEP QRILCLTYTK
AAASEMQNRL FRRLGEWAML DDAELRHALD TLGVAAVGHE VLAQARRLFA RAIETPGGLR
IQTIHSFCAT LLRRFPLEAG VSPQFTELDD RAARLLREEI VEELADRIAP GVVADLARAY
TGEDFGALAE EVARNAAGLL PPLDAPACRA LYGVEGDEAA LLAQVFLGGE AEWMPALIAA
LEAGSANDQK AAAKLRLLSF ASPTTATLAG LEGVLLTGAS AKEPYTAKLG SFPTKATRGA
LGPLADRLDA LMRRVEAARP VRCCLLAAER ARLIHAFAGV FLPLYQARKA ARGWLDFDDL
IQRAKGLLTD PSVAQWVLFR LDGGIDHILV DEAQDTSPDQ WKVIELLAQE FTSGRGAREV
ERTIFVVGDK KQSIYSFQGA DVAAFDRMRA EFGERLAGAR RRLEELDLLH SFRSSPAILR
LVDLTFDEPR RQALGGEVRH IAFRGDMPGR AELWPLVEAA EEPEPENWFD PVDLVSDEHH
AARLARQVAT RIRAMIEAGV QIPQPGGFRP VAAGDFLILV QRRSDIFGEI IRACKEARLP
IAGADRLKLG AELAVRDLSA LLAFLATPED DLSLAAVLRS PLFGWSEGEL FDLAHGREGY
LWRRLYDREA AHPATVAILR DLRDQADFLR PFDLIERALT RHDRRRRLLA RLGEEAEDGI
DELLSQALAY ERTDVPSLTG FLTWLQTDEV EVKRQMEAAG GRIRVMTVHG SKGLEAPIVI
LPDTADRKPR ERDELFTLEG GARVWKTPAA ESPPQIAAAR EARRARDAAE NLRLLYVAMT
RAQCWLIAAA AGKLETGGAW HDLIRQGMEA AGAERRDDGA LVLDEGLWPP AAPQASAAAA
AARPVLPAWA LAPAAEPPAA PEVLSPSALG GAKALPGDAM PTEEALAHGS AVHRLLEHLP
LHPPEGWEAA ARGLLPDLPD VAPVLAEARA VLSAEHLAEA LVPHALLEVA VTAKVAGRRL
SGTIDRLVVE PDRVLAVDYK TNRVVPDRPE EVPEGILRQM GAYAEALAQI YPGRTIETAI
LWTQAARLMR LPRDIVRSAM VRATTT
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