| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_0155 |
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| Symbol | |
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| ID | 4898077 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17029 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009049 |
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| Strand | + |
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| Start bp | 169652 |
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| End bp | 170299 |
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| Gene Length | 648 bp |
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| Protein Length | 215 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640110737 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_001042046 |
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| Protein GI | 126460932 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.62363 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGATC TCTATGCCCC GCCGGATGTT CCCCTCTCGC TGATCCATCA CGATGCGCAG
ATCGTGGTGG TGGACAAGCC TGCGGGCCTT CTGTCGGTGC CGGGCAAGGG CGAGGACAAG
GCCGACTGCC TGATCGAGCG GCTGAGGGGC GTCTTTCCCG AGATCCTGCT GGTGCACCGG
CTCGACCGCG ACACGTCGGG CGTGATGGTC TTCGCGCTGA CCAAGGCCGC TCAGGGCGCG
CTCGGCCAGC AGTTCGAGAA GCGGCAGACG AAGAAGATCT ATGTGGCGCG CGTCGCGGGC
CGGCTCGAGC CGCGCGAGGG GCGGGTGGAC CTGCCGCTCT GCGTCGACTG GCCGAACCGG
CCGAAGCAGC ATGTGGATCC CGAGAACGGC CGCCCGGCGC AGACCGACTG GCGCGTCGTG
AAATACCTGC CGAAGGAGAC GCGGGTGCGG CTGATGCCGG TCACGGGCCG CAGCCACCAG
CTCCGGGTGC ATATGGCCGA GACGGGGCAC CCGATTCTCG GCGACGCGCT TTATGCCGAA
GGGGCGGCGC GCGACTTCCC GCGGCTCATG CTCCATGCCG AGAGCCTGCG GGTGCGCCAT
CCCGACACGG GCAAGAGCCT TACCTACAGC GCGCCCTGTC CCTTCTGA
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| Protein sequence | MTDLYAPPDV PLSLIHHDAQ IVVVDKPAGL LSVPGKGEDK ADCLIERLRG VFPEILLVHR
LDRDTSGVMV FALTKAAQGA LGQQFEKRQT KKIYVARVAG RLEPREGRVD LPLCVDWPNR
PKQHVDPENG RPAQTDWRVV KYLPKETRVR LMPVTGRSHQ LRVHMAETGH PILGDALYAE
GAARDFPRLM LHAESLRVRH PDTGKSLTYS APCPF
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