| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_0126 |
|---|
| Symbol | |
|---|
| ID | 4895972 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17029 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009049 |
|---|
| Strand | + |
|---|
| Start bp | 139992 |
|---|
| End bp | 141230 |
|---|
| Gene Length | 1239 bp |
|---|
| Protein Length | 412 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640110709 |
|---|
| Product | saccharopine dehydrogenase |
|---|
| Protein accession | YP_001042018 |
|---|
| Protein GI | 126460904 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1748] Saccharopine dehydrogenase and related proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.281282 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAGAAGA ACGTGTTGAT CATCGGTGCC GGCGGCGTCG CACAGGTGGT GGCGCACAAA
TGCGCGCAGA ACAATGACGT GCTGGGCGAC CTGCACATCG CTTCGCGCAC GGTCTCGAAA
TGCGAGGCGA TCATCGCCTC GGTGCACGAG AAGGGCGCGA TGAAGGTGGC GGGCCGGTTC
GAGCCGCATG CGGTCGATGC GACGGACACG GCCGCGGTGG CGGCGCTGAT CCGCGGGACC
GGCGCGGAGA TCGTGATCAA CGTGGGCTCC GCCTTCGTCA ACATGCCCGT GCTCGAGGCC
TGTCTGGAGA CCGGCGCCGC CTATATGGAT ACGGCGATCC ACGAGGATCC GGCGAAGATC
TGCGAGACGC CGCCGTGGTA CGGCAACTAC GAATGGAAGC GGCGCGAGCG CTGCGCCGAG
GCGGGGGTCA CGGCGATCCT AGGCGTGGGC TTCGACCCGG GGGTGGTGAA CGCCTATGCG
CGGCTGGCGG CGGACGAGTA CCTCGACGAG GTGCGCTCGA TCGACATCGT CGACATCAAC
GCGGGCAGCC ACGGGCGCTG GTTCTCGACC AACTTCGATC CGGAGATCAA TTTCCGCGAA
TTCACCGGGA CGGTCTATTC CTGGCAGAAC GGCGACTGGC AGTCGAACCG CATGTTCGAG
GTGGGGCAGG AGTTCGACCT GCCGGTGGTG GGCAAGCAGC AGGCCTACAT GACCGGCCAT
GACGAGGTCC ATTCGCTGGC GGCCAACTAT CCGCAGGCGG ACGTGCGCTT CTGGATGGGG
TTCTCGGACC ATTACATCAA TGTCTTCACC GTGCTGAAGA ACCTCGGGCT TCTGTCCGAG
AAGCCGGTCA GGACCGCCGA GGGGCTCGAG GTCGTGCCGC TGAAGGTGGT GAAGGCCGTG
CTGCCCGATC CGTCCTCGCT CGCGCCGGAC TATACCGGCA AGACCTGCAT CGGCGACATC
GTGAAGGGGA CGAAGGACGG CCAGCCCGCC GAGGTCTTCA TCTACAACGT GGCCGACCAT
GCCGAGGCCT ATGCCGAAGT GGGCTCGCAG GGGATTTCCT ACACCGCGGG GGTACCGCCG
GTGGCGGCGG CGATCCTCGT GGCCGAAGGC ACCTGGGACG TGAGGAAGAT GGCCAATGTC
GAAGAGCTGG ATCCGAAGCC CTTCCTCGCG CTGCTGAACC GGATGGGGCT GCCCACGCGG
ATCAAGGATG CGGCGGGGGA TCGGGCGCTC GAGTTCTGA
|
|---|
| Protein sequence | MKKNVLIIGA GGVAQVVAHK CAQNNDVLGD LHIASRTVSK CEAIIASVHE KGAMKVAGRF
EPHAVDATDT AAVAALIRGT GAEIVINVGS AFVNMPVLEA CLETGAAYMD TAIHEDPAKI
CETPPWYGNY EWKRRERCAE AGVTAILGVG FDPGVVNAYA RLAADEYLDE VRSIDIVDIN
AGSHGRWFST NFDPEINFRE FTGTVYSWQN GDWQSNRMFE VGQEFDLPVV GKQQAYMTGH
DEVHSLAANY PQADVRFWMG FSDHYINVFT VLKNLGLLSE KPVRTAEGLE VVPLKVVKAV
LPDPSSLAPD YTGKTCIGDI VKGTKDGQPA EVFIYNVADH AEAYAEVGSQ GISYTAGVPP
VAAAILVAEG TWDVRKMANV EELDPKPFLA LLNRMGLPTR IKDAAGDRAL EF
|
|---|
| |