Gene Rsph17029_0120 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_0120 
SymbolrnhB 
ID4897130 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009049 
Strand
Start bp135676 
End bp136314 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content66% 
IMG OID640110703 
Productribonuclease HII 
Protein accessionYP_001042012 
Protein GI126460898 
COG category[L] Replication, recombination and repair 
COG ID[COG0164] Ribonuclease HII 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.105458 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAATCA CCTGCCCCGA CTGGACCCAC GAGACCGCCG CCCTTGCCGA AGGCTTCACC 
TGCGTCGTCG GCGTCGACGA GGTGGGGCGC GGCCCGCTCG CGGGCCCGGT GACGGCCGCC
GCGGTGCGCC TTTTCCCCGG ACGCATCCCC GAAGGGCTGA ACGACAGCAA GAAGCTGACC
GCCCTGCGGC GCGAGATGCT TGCCGCCGAG ATCCACACCG TGGCCGAGGT CTCGATCGCC
CATGCGTCGG TCGAGGAGAT CGACCGGCTC AACATCCTTC AGGCAAGCCA CCTCGCCATG
GGGCGGGCGC TGGCGGGCCT GCCCTCTCGG CCCGACTTCG CGCTGATCGA CGGGCATATG
GTGCCCAAGG GTCTCGGCCA CCGCTGCCGG GCCATCGTCA AGGGAGATGC GCTCTGTCTC
TCGATCGCCG CGGCCTCGAT CGTGGCCAAG GTCGCCCGCG ACCGGATCAT GGTGGATTTG
GAGCAACAGC ACCCCGGCTA CGGCTGGCGC ACCAACGCGG GATACGGGAC GAAGGATCAT
CTTCAGGCTC TTCTAAATCT TGGCCCGACC CCTCACCATA GGCGTTCGTT CAAACCCGTC
CACAATATCT TGTATCAAGA GGCTTCCATA AGCCCTTGA
 
Protein sequence
MEITCPDWTH ETAALAEGFT CVVGVDEVGR GPLAGPVTAA AVRLFPGRIP EGLNDSKKLT 
ALRREMLAAE IHTVAEVSIA HASVEEIDRL NILQASHLAM GRALAGLPSR PDFALIDGHM
VPKGLGHRCR AIVKGDALCL SIAAASIVAK VARDRIMVDL EQQHPGYGWR TNAGYGTKDH
LQALLNLGPT PHHRRSFKPV HNILYQEASI SP