| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_0088 |
|---|
| Symbol | |
|---|
| ID | 4896279 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17029 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009049 |
|---|
| Strand | - |
|---|
| Start bp | 100105 |
|---|
| End bp | 101004 |
|---|
| Gene Length | 900 bp |
|---|
| Protein Length | 299 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 640110671 |
|---|
| Product | periplasmic binding protein |
|---|
| Protein accession | YP_001041980 |
|---|
| Protein GI | 126460866 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGTAGGAG GCGGCGCCCT CAGCCGACGG AGCTTCCTCG CCGCCGCCAG CCTCGCGCTG
GCGGCGGCCT CGTCCCTGCG GGCAGCTCCC CCGGTCGCGC CGCGCCTTGC CGCCATCGAC
TGGGCCATGC TCGAGACGGC CATCGCGCTC GGGCACATGC CGGTGGCCGC CTGCGAGCTG
ATCCGCTTCC GCAAGGACGC GCCCGAGCCG CCGGTGCCGG AGGGTGTGGT GGATCTGGGC
CTGCGCGGCG CGCCGAACTT CGAGCTGCTC CAGCTCGTGC GCCCCGATCT CATCCTGACC
TCGCCCTACT ACACCCGCTA CGAGGCCCGC CTGTCGCAGC TGGCCCCGGT GCTGAACCTG
CCGTTCTACA TCCGGGGCGA GCCGCCGCTG CCCAAGACCT TCGCGGCGCT GCACAATCTG
GCCCGCGCCA TCGACGATCC GGGCGCGGCC TTGCGGGCCG AGGAAGCGGC CGAGGCCCGG
TTCGATGCCG TGGCCGCGGA TCTGGCCCCG ATGGCGGACC GGCCGATCTG CCTCGTCAAT
ATCGGCGACG CCCGCCACCT GCGCGCCTTC GGCTTCGACA GCCTGTTCGG ATCGGTGGCG
ACGCGGCTCG GCCTCACGAA CGGCTGGGAG GGGCAGACGC GGTTCAGCTT TCTCGCCCCG
GTGCAGATCG AGGAGCTTGC GCGCCTGCCC GAGGCGCGGG TGGTGATCGT GGGCGAGATC
CCGGTGCAGG CGCGGCGGGG GCTCGCGCGG TCGAAGCTCT GGCAGGCGCT GCCCGCGGTG
CGGGGCGGCC GGGTCTATCA GCTGCCCGAG GTCAATGCCT TCGGAGGCCT GCCCTCGGCG
CTGCGCTTCG CCCGAATGCT CGGCGCAGCG CTCACCCGGC CCGCGGAGCT GCGGCTGTGA
|
|---|
| Protein sequence | MVGGGALSRR SFLAAASLAL AAASSLRAAP PVAPRLAAID WAMLETAIAL GHMPVAACEL
IRFRKDAPEP PVPEGVVDLG LRGAPNFELL QLVRPDLILT SPYYTRYEAR LSQLAPVLNL
PFYIRGEPPL PKTFAALHNL ARAIDDPGAA LRAEEAAEAR FDAVAADLAP MADRPICLVN
IGDARHLRAF GFDSLFGSVA TRLGLTNGWE GQTRFSFLAP VQIEELARLP EARVVIVGEI
PVQARRGLAR SKLWQALPAV RGGRVYQLPE VNAFGGLPSA LRFARMLGAA LTRPAELRL
|
|---|
| |