| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17029_0072 |
|---|
| Symbol | |
|---|
| ID | 4895449 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17029 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009049 |
|---|
| Strand | - |
|---|
| Start bp | 80184 |
|---|
| End bp | 80882 |
|---|
| Gene Length | 699 bp |
|---|
| Protein Length | 232 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640110649 |
|---|
| Product | orotidine 5'-phosphate decarboxylase |
|---|
| Protein accession | YP_001041964 |
|---|
| Protein GI | 126460850 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0284] Orotidine-5'-phosphate decarboxylase |
|---|
| TIGRFAM ID | [TIGR01740] orotidine 5'-phosphate decarboxylase, subfamily 1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.109683 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGACG ACCGTCTGAT CGTGGCACTC GATGTGCCGA ACGTCGTGCA GGGGCTGGAT
CTCGCGGAGC GGCTCGGCGA TGCGGTCTCG TTCTACAAGA TCGGCTTGGG CATGCTGACC
GGCGGCGGCC TCGCGCTGGC CAACGAGCTG AAGCAGGAGC AGGGCAAGCG CATCTTCCTC
GACATGAAGC TCTTCGACAT CGGCGCGACC GTCGAGGCCG CCGTGCGGGG CTTCGCGAGC
TACGATCTCG ATTTCCTGAC GGTCCATGGC GATCCGCAGG TGGTGCGGGC CGCGGTGCAG
GGCGCCTCGG GCAGCGGGCT GCGCATTCTG GCGGTGACGG TGCTGACCTC GCTCGACCGG
GCGGATCTCG ATGCGAACAT GATCCGGGCG GGCGATCTGG CCGAGATCAC GCTCGAGCGG
GCGGCGCGGG CGCTGGATGC CGGGGCGCAT GGGGTGATCG CGAGCCCGCA GGAGGCGGCG
GCGATCCGGG CCCTGCCGCA GGCGGCGGGT CGGCTGATCG TGACGCCGGG CGTGCGGCCC
ACGGGCGCCG CGCTCGGCGA TCAGAAGCGG GTGGCAACCC CCGCCCGCGC GATCGCGGAC
GGGGCGGACC ATATCGTCGT CGGCCGGCCG ATCTGGCAGG CCGGGGATCC GCGGGCCGCG
GCTCTCGCCG TTCAGGCAGA GCTTCCGACC CGCGGCTGA
|
|---|
| Protein sequence | MADDRLIVAL DVPNVVQGLD LAERLGDAVS FYKIGLGMLT GGGLALANEL KQEQGKRIFL
DMKLFDIGAT VEAAVRGFAS YDLDFLTVHG DPQVVRAAVQ GASGSGLRIL AVTVLTSLDR
ADLDANMIRA GDLAEITLER AARALDAGAH GVIASPQEAA AIRALPQAAG RLIVTPGVRP
TGAALGDQKR VATPARAIAD GADHIVVGRP IWQAGDPRAA ALAVQAELPT RG
|
|---|
| |